Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0689 ATGGAGGAACACAGTGGAAAAGGGATAGATCCGAGAAGTGGGTTCTGCACTGCAAATTCAATCTTCTACAGTAAGCGCAAGCCCCTTCCACTCCCTCCCAACAACGCCTTAGACGTCACCACATTCATCTCCTCACGCGCCCACCGGGGAACCACCGCCTTCATCGACGCAGCCACAGGGCGGCACTTCACCTACCAACAGCTATGGCAGGCGGTGGACGCCGTGGCCGCCTCTCTCTCGGACATGGGCATCGGAAAGGGGAACGTGGTCCTCCTCCTCTCTCCCAACTCCATCTACTTCCCAGTGGTGTGCCTGGCCGTCATGTCCCTCGGAGCCATCATCACCACCACCAACCCTCTCAACACCTCGCGCGAAATAGCCAAACAGATCGCCGATTCCAAGCCCCTCCTCGCCTTCACAATCCCTCCCCTGCTTCCCAAGCTCACAGCCGCATCACCCTCCCTCCCAATCGTTCTCATGGACCACGCCGATTCACCCCCTCCCAGAATAGTTACCACGCTTGAGGAGATGATGAAGAAGGAACCCGGGGCTAGGCGAGTGAGGGAACGAGTTGACCAGGATGACACGGCCACGCTGCTCTACTCCTCCGGCACTACGGGACCCAGCAAGGGCGTGGTTTCTTCGCACCGGAACCTAATATCGATGGTTCAGATCGTGTTGGGTCGGTTCAGAATGGAAGAGGGGGAAACCTTCATCTGCACAGTGCCCATGTTCCACATATACGGTCTGGTGGCGTTCGCGACGGGGATTCTGGCTTCGGGATCCACCATCGTGGTGCTGTCCAAGTTCGAGATGCACGACATGCTGTCGGCAATTGAGAGGTTTGGTGCGACGTACCTGCCGCTGGTGCCGCCCATACTGGTGGCGATGCTGAACAACGCCGATGCGATAAAGGGAAAGTACGATTTGAGGTCGCTGCATTCCGTGCTCTCCGGTGGGGCTCCGCTGAGCAAGGAGGTGATAGAGGGGTTCGTGGAGAAGTACCCCAACGTCGCCATCCTTCAGGGTTATGGCTTGACGGAATCAACCGGCGTTGGGGCCTCCACCGATTCCTTGGAGGAGAGTCGAAGGTACGGCACCGCCGGCCTCTTGTCGCCTTCCACTCAGGCTATGATCGTCGACCCTGACTCCGGTCAGTCCGTTCCGGTTAACAGCACCGGTGAGCTCTGGCTCAGGGGTCCCACCATTATGAAAGGCTACTTTAGTAACGAGGAGGCAACCACATCAACCCTTGATTCAAAGGGATGGTTGAGAACAGGGGATGTGTGTTACATCGACAATGATGGATTCATATTTATTGTCGATAGATTGAAAGAGCTCATTAAATACAAGGGATATCAGGTCCCTCCAGCAGAACTAGAGGCCTTGTTGCTGACTCATCCTGCTATTTTAGATGCTGCTGTCATACCGTATCCAGATAAGGAGGTTGGGCAGTATCCAATGGCATATGTGGTAAGGAAGGCTGGAAGTAGCATATCAGATAGCCAAGTTATGGAGTTCGTTGCAGGACAGGTGGCTCCTTACAAGAGAATTCGAAAAGTGGCGTTTATATCTTCCATACCCAAAAACCCATCTGGCAAAATTCTTCGGAAGGATCTCATCAAGCTCGCAACCTCTAAACTCTGA 1647 0.5464 MEEHSGKGIDPRSGFCTANSIFYSKRKPLPLPPNNALDVTTFISSRAHRGTTAFIDAATGRHFTYQQLWQAVDAVAASLSDMGIGKGNVVLLLSPNSIYFPVVCLAVMSLGAIITTTNPLNTSREIAKQIADSKPLLAFTIPPLLPKLTAASPSLPIVLMDHADSPPPRIVTTLEEMMKKEPGARRVRERVDQDDTATLLYSSGTTGPSKGVVSSHRNLISMVQIVLGRFRMEEGETFICTVPMFHIYGLVAFATGILASGSTIVVLSKFEMHDMLSAIERFGATYLPLVPPILVAMLNNADAIKGKYDLRSLHSVLSGGAPLSKEVIEGFVEKYPNVAILQGYGLTESTGVGASTDSLEESRRYGTAGLLSPSTQAMIVDPDSGQSVPVNSTGELWLRGPTIMKGYFSNEEATTSTLDSKGWLRTGDVCYIDNDGFIFIVDRLKELIKYKGYQVPPAELEALLLTHPAILDAAVIPYPDKEVGQYPMAYVVRKAGSSISDSQVMEFVAGQVAPYKRIRKVAFISSIPKNPSGKILRKDLIKLATSKL* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0689 548 ProSitePatterns Putative AMP-binding domain signature. 199 210 IPR020845 -
Apr9g0689 548 Gene3D - 20 445 IPR042099 -
Apr9g0689 548 CDD 4CL 31 540 - -
Apr9g0689 548 Gene3D - 446 547 IPR045851 -
Apr9g0689 548 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 9 547 - -
Apr9g0689 548 Pfam AMP-binding enzyme 46 450 IPR000873 -
Apr9g0689 548 SUPERFAMILY Acetyl-CoA synthetase-like 45 546 - -
Apr9g0689 548 Pfam AMP-binding enzyme C-terminal domain 459 534 IPR025110 -
Apr9g0689 548 PANTHER BNAA06G14440D PROTEIN 9 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0689 Apr-Chr9 11395144 11398790 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0689 9 548 Monolignol Biosynthesis Gene Families AT1G20500 65.146 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0689 K10526 - gmx:100811344 945.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0689 9 11395144 11398790 Apr9g0689 9 11395144 11398790 ECH