Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0688 ATGGCAAGGAAGTGGCAAAGAATGGCCAGAATCAAAAGGAGAAAGATCTCGCTGCCTAGAAAAAGAATGAAGCATAAAGTAGCAGAGAAAGGTCACTTTGTGGTGTACACCGCTGACAAAGTACGTTTTGTGGTACCATTGACTTATCTGAGAAACAATATATTCAGAGAGTTGTTGAGGATGTCTGAGGAACAGTTCGGCCTCCATATTGATGGTCCAATAATATTGCCCTGTGACGCAGCCTTCATGGAATATGTCGTGTCTTTGGTTCAGAAACACTTGTCTTTGGAGCTTCAGAATGCATTGCAGCTTATAGCATCTCTTGGTTTTGGTTTTGGATCTAACTGCCACTGTCTCACACCTATGCCTGCATCTCAGCCTCTCGCTGTTGTCTAA 396 0.4343 MARKWQRMARIKRRKISLPRKRMKHKVAEKGHFVVYTADKVRFVVPLTYLRNNIFRELLRMSEEQFGLHIDGPIILPCDAAFMEYVVSLVQKHLSLELQNALQLIASLGFGFGSNCHCLTPMPASQPLAVV* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0688 131 Pfam Auxin responsive protein 3 89 IPR003676 GO:0009733
Apr9g0688 131 PANTHER AUXIN-RESPONSIVE FAMILY PROTEIN 1 105 IPR003676 GO:0009733
Apr9g0688 131 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR66-LIKE 1 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0688 Apr-Chr9 11378769 11379164 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0688 30 94 Calmodulin-binding Proteins AT5G20810 31.818 6.00e-10 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0688 - - lang:109352902 163.696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0688 9 11378769 11379164 Apr9g0688 9 11378769 11379164 ECH