Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0686 ATGGCAGGTCAATGCTCCAATGAAGGCTCTAGTACTGGAAATATTTCGGCAGAGTGTTCAGATTCAACTGTTCAGCTCAATATTAAGACTCTAGATTCCCGCATCTTCAGTTTTCAAGTGGACAAAAATATGCCTGTTTCATTGTTCAAAGAGAGAATTGCAAATGAAATTGGTGTTCCAGTTAGTCAGCAACGGTTGATATTTAGAGGAAAAGTCTTAAAGGATGAGCACATTCTATCTGAGTATTATGTTGAGAATGGGCATACATTGCATTTAGTTGAAAGACAACCAAATCAATCACAGACTTCTGGTACAAGCTCTGGTGAGCCAAGTGGTACAAATGGTAACCGAGGAAATGATGTAGCCTCAGGGGCTCCTCGCAACCGTATTGGACAAATTTCACACAGTCTTGTTCTCGGGACTATTAATGTGGTTGAACAAGGTGAAGGCTTTGTTCATGACCTCTCTCGGGTTATTGGGCAGGTTTTGAATTCTATTGGAAATGGTGGCCAGAGCACTATTAGTGGTCCTAATGCTGTCCAAACTTCTTCGGCTCTCCCAGGGAATGAAACTGAAGGAATGCATGCTGGAAATCCAAACCTAGCAGGAAATCAAGCACCATCTGGACAGACATTCCCTGGTCAGGCATTCCAATCTATGTCTCATGTTGTTCAGATTCCTATGGCTGCAGGAGCCATACCCCTTCCTTCTCTCAATGCACCAATTCCTGATTCATTGAACACTCTGTCTGAGTTTATAAATCGCATGGAACAGACACTATCACAAAATGGTTATAGGTCAAATCCTTTGTCGACTAACCCTGGAGATCAGCGAGGGGAGTTGCCTTCTAATGCACAAGGGTTGCCAACACTTGAAGCATTAAGCACTGTCTTGCGTCATGCAGAACAGTTACTTGGTGGTCAAGCTGTTGCTGCGCTATCTCATATTGCAGGACGCTTGGAAAGAGAGGGTACTTCTTCTGATTTACAAATCAGGGGTCAAATACAGTTAGAGTCAACACAAATAGGAGTTGCTATGCAGCATTTGGGTGCACTTCTACTTGAACTTGGCCGAACAATGTTGACACTGCGTATGGGGCAGTCTTCTGCTGAATCTGTTGTTAATGCTGGACCAGCAGTTTATATTTCTCCAGCCGGGCCAAATCCTATAATGGTGCAGCCTTTTCCACTTCAGACAAGCTCCCTCTTTGGTGGTCCTGTTCCCTCTTCAACTCCTGCAACTTTAGGAACCATTGGTACCGCCCTTGCACCAGTGGTTTCAACAATTGGTTCTAGACCAAATAATGGAGAAGGGACAAGAAGTGAACGCCGTAGTGAGCCTGGCTCTGGTGATTCAGGTTCAACACGAGTATTACCTGTTAGAAATGTTGTAGCAGCTACTCTCCAACCACACCCTCCTGGTGTTGGAGTCTCTAGTAGCACACAAACTGGGTTTGGTGTTTCTACTTCACAGCCTCCTTCTGATTCAGCTTCATTGTCATCTGTTTTGGCTGAAATAAATTCTCGCCTTAGAAACGTTGTTGGTAACATGCAAGGAGATAACATGGTTCCATCAGGTCAAGTGGAATCAAACAGCAGAGACTTGTCTTCTGTATCTGAATCAGCATCTGCACAGGGAAATGAACAAGAAGATACAATGGGGATGAATGGCTATGGCTGTGCTTCTGAAAGCGGAGCACAGAAGCCCCAAACTGAGGCAGTCCAAACCTGTAGTAATGACGAGAGAGATGTTTTGGTTAACGAACTAGTTTCAAGTTCTTCCAACCAAGATTTACAAAGTGGTTCTGGTGGAGAAACAACAGTAAGATCAGAAAAAGAACAAGATGCCCCATCTGTAAGTGAAAGACAAGATGTAATTGAACCTGCCAAAGCTGCTCCGCTAGGATTGGGTCTTGGTAGTTTAGAGCGCAAGCGGAGAGCTAGACTTCAACCTTCTGTAAGTAAAGGTGCTGACAATGGATCATCCAGTTCCTCTGTCAATCAAAATCAGCAAACCACAACAGATGGTCAACATATATTGCAAACCCTTGCGAGTCATGGATCTTCTGAAAATTCAAGAAATGCTAATGGTCCATCTCAGCGGCCCTTACCCTCCAGTGATCGCCCAATTGATGTAGCTGGTTTAATGTCTCAGGTTTTACATAGTCCAGCTTTGAATGGTTTGTTGGAGGGAGTTTCCCAGCAAACTGGAGTTGACTCACCTGATGGCTTGAGGAATATGTTGCAACAGTTCACACAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATGTGGGTAATATGTTTGCAGGAATGGGAAGAGGGCAGGGTGGTGGTATTGACTTGTCAAGGATGTTTCAACAGATGATGCCCATTGTATCTCGAGCCCTTGGTGGTGGAAATCCTCCCTCACTATTTTCTGGTGCAGAAGCAGAACCCCATGCACCCTACAGAGATGGAACAGTTAACAGAGATGAATATTCTGATAATCCAAGTTCACAGCTTCAACCTCTGGCTGAGAGAATTGAGCACCTCTGTCCACCCACCGATGTTTTCCGTGCAGTTGCTGAAAATGCTGTCCAGCTATCTGGCAGTGGAAGTGCTTCTAACGATCTTCTGGATGAGTTATGCAGCAATGAGAGTCTTGCCAGGGAATATGTGGAGATGTTGCGATGTGATGTAAGTCAGCTGCTCAAGGGACATTCTGAACCGGACAAATCCTAA 2748 0.4472 MAGQCSNEGSSTGNISAECSDSTVQLNIKTLDSRIFSFQVDKNMPVSLFKERIANEIGVPVSQQRLIFRGKVLKDEHILSEYYVENGHTLHLVERQPNQSQTSGTSSGEPSGTNGNRGNDVASGAPRNRIGQISHSLVLGTINVVEQGEGFVHDLSRVIGQVLNSIGNGGQSTISGPNAVQTSSALPGNETEGMHAGNPNLAGNQAPSGQTFPGQAFQSMSHVVQIPMAAGAIPLPSLNAPIPDSLNTLSEFINRMEQTLSQNGYRSNPLSTNPGDQRGELPSNAQGLPTLEALSTVLRHAEQLLGGQAVAALSHIAGRLEREGTSSDLQIRGQIQLESTQIGVAMQHLGALLLELGRTMLTLRMGQSSAESVVNAGPAVYISPAGPNPIMVQPFPLQTSSLFGGPVPSSTPATLGTIGTALAPVVSTIGSRPNNGEGTRSERRSEPGSGDSGSTRVLPVRNVVAATLQPHPPGVGVSSSTQTGFGVSTSQPPSDSASLSSVLAEINSRLRNVVGNMQGDNMVPSGQVESNSRDLSSVSESASAQGNEQEDTMGMNGYGCASESGAQKPQTEAVQTCSNDERDVLVNELVSSSSNQDLQSGSGGETTVRSEKEQDAPSVSERQDVIEPAKAAPLGLGLGSLERKRRARLQPSVSKGADNGSSSSSVNQNQQTTTDGQHILQTLASHGSSENSRNANGPSQRPLPSSDRPIDVAGLMSQVLHSPALNGLLEGVSQQTGVDSPDGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDVGNMFAGMGRGQGGGIDLSRMFQQMMPIVSRALGGGNPPSLFSGAEAEPHAPYRDGTVNRDEYSDNPSSQLQPLAERIEHLCPPTDVFRAVAENAVQLSGSGSASNDLLDELCSNESLAREYVEMLRCDVSQLLKGHSEPDKS* 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0686 915 MobiDBLite consensus disorder prediction 94 121 - -
Apr9g0686 915 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 913 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 811 841 - -
Apr9g0686 915 PRINTS Ubiquitin signature 55 75 IPR019956 -
Apr9g0686 915 PRINTS Ubiquitin signature 76 97 IPR019956 -
Apr9g0686 915 MobiDBLite consensus disorder prediction 591 673 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 169 189 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 654 673 - -
Apr9g0686 915 PANTHER OS07G0498800 PROTEIN 6 913 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 686 710 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 169 214 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 473 500 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 516 552 - -
Apr9g0686 915 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Apr9g0686 915 MobiDBLite consensus disorder prediction 260 286 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 516 577 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 563 577 - -
Apr9g0686 915 SMART ubq_7 24 95 IPR000626 GO:0005515
Apr9g0686 915 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Apr9g0686 915 MobiDBLite consensus disorder prediction 426 457 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 591 607 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 686 703 - -
Apr9g0686 915 CDD Ubl_ubiquitin_like 26 93 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 469 500 - -
Apr9g0686 915 MobiDBLite consensus disorder prediction 94 127 - -
Apr9g0686 915 Gene3D - 13 108 - -
Apr9g0686 915 SUPERFAMILY Ubiquitin-like 19 98 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0686 Apr-Chr9 11308421 11318796 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0686 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 37.500 4.07e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0686 - - gmx:100783611 1437.17