Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0673 ATGGGATTGAGATTGTCTAAGAAACCAAACCATGAAATTGTTGTTGCCTCTCCAGATTCCTCGCCTAAGCTTACCTACAAACAACCAAGGATAAGGCATCCACTTCCACCTTCACTTCCTCCTCCCAAACTCATCCAATCTTCACAAACAGGACCACTTCTTGGGAAACCGTACGTTAACATAAACCAAATGTATGAGATGAAGAAAGAGTTGGGAAGAGGCAACTTTGGGGTCACTTATCTGTGTGTTGACAAGATCACAAGACAAGAGTATGCATGCAAATCCATTCCAAGGGGGAAGTTGCTAAACATGCAAGAAAGTGGGGATGTTAGAAGAGAGGTTATGATTCTACAACATCTTTCTGGGCAACATAACATTGTGGAATTCAAGGGAGCTTGTGAGGACAGGCAGAACGTGCACCTTGTCATGGAATTGTGTAGTGGTGGCGAACTCTTCCACCACATTGTTGCCAAAGGTCGTTACACGGAGCGTGAAGCAGTAATTGTAATGAGGCAAATTGTGAATGTGATTCATGTGTGCCATTTCATGGGTGTAATGCATCGAGACCTCAAGCCAGAGAATTTCTTGTTCGCCACCGAGGACGAGAATGCCACATTGAAACTTGTCGATTTTGGTTTCTCTGTCTTCATTGAGGAAGGTAAAGCATATAAAGACATTGTTGGAAATGCATATTATGTGGCACCAGAGGTTTTGAAACGGAGTTATGGAAAGGAGATAGATGTTTGGAATGCAGGAGTAATTTTATACATTCTCTTGAGTGGGGTGCCTCCATTTTGGGTTGGCATGGTTGATGCTATTTCAGGAGGTAAATTAGATATGGATAGTGAGCCATGGCCATCTATTTCGGATGCTGCAAAAGATTTGATCAGAAAAATGCTGACCTATGACCCTAAGAAACGCATTACAACTTCTGAAGCCTTTGAACATCCATGGATGAAGGAAGGTGCTGACGCATTTAACAACCCTCCTGACAGCGTTGTTTTAATTAGGATGAAACAATTCAAAGCAATGAACCAGATGAAGAAACTTGCTTTGAAGGTAATAGCAGAAAATCTTTCTGAGGAAGAAATGAAGGGCATGAGACAAATGTTCAACAATATGGATACTGATCGCAGTGGCACAATCACATTCAAAGAACTCAAATCTGGACTATCCGGATTGGGTTCCCAACTTAGCGACTCTGAACTAAGGCAGCTAATGGATGCTGCTGACGTTGACAAGAATGGAACTATTGACTATTGTGAATTGATTACTGCCACTATGGATCAGCATAAACTGGAGAGGGAAGATAACTTGTCAAAGGCTTTTCAATACTTTGACAAGGATAACAGTGGTTACATAACAAGAGATGGGCTTAGACAAGCAATAACAGAGTACCAAATGGGTGATGAAATATCTATAGAGGAGGCCTTCCACTGCATTGACTCTGACAAAGATGGGAGAATTGATTACCACGAGTTTGCAACGATGATGAGAAATGGATGTTGA 1509 0.4175 MGLRLSKKPNHEIVVASPDSSPKLTYKQPRIRHPLPPSLPPPKLIQSSQTGPLLGKPYVNINQMYEMKKELGRGNFGVTYLCVDKITRQEYACKSIPRGKLLNMQESGDVRREVMILQHLSGQHNIVEFKGACEDRQNVHLVMELCSGGELFHHIVAKGRYTEREAVIVMRQIVNVIHVCHFMGVMHRDLKPENFLFATEDENATLKLVDFGFSVFIEEGKAYKDIVGNAYYVAPEVLKRSYGKEIDVWNAGVILYILLSGVPPFWVGMVDAISGGKLDMDSEPWPSISDAAKDLIRKMLTYDPKKRITTSEAFEHPWMKEGADAFNNPPDSVVLIRMKQFKAMNQMKKLALKVIAENLSEEEMKGMRQMFNNMDTDRSGTITFKELKSGLSGLGSQLSDSELRQLMDAADVDKNGTIDYCELITATMDQHKLEREDNLSKAFQYFDKDNSGYITRDGLRQAITEYQMGDEISIEEAFHCIDSDKDGRIDYHEFATMMRNGC* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0673 502 Gene3D - 329 500 - -
Apr9g0673 502 ProSiteProfiles EF-hand calcium-binding domain profile. 362 397 IPR002048 GO:0005509
Apr9g0673 502 SMART serkin_6 65 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0673 502 Pfam Protein kinase domain 65 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0673 502 CDD EFh_PI-PLC 367 500 - -
Apr9g0673 502 MobiDBLite consensus disorder prediction 1 45 - -
Apr9g0673 502 ProSiteProfiles EF-hand calcium-binding domain profile. 469 502 IPR002048 GO:0005509
Apr9g0673 502 ProSiteProfiles EF-hand calcium-binding domain profile. 434 468 IPR002048 GO:0005509
Apr9g0673 502 SUPERFAMILY Protein kinase-like (PK-like) 65 332 IPR011009 -
Apr9g0673 502 ProSiteProfiles EF-hand calcium-binding domain profile. 398 433 IPR002048 GO:0005509
Apr9g0673 502 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 28 501 - -
Apr9g0673 502 CDD STKc_CAMK 65 318 - -
Apr9g0673 502 ProSitePatterns EF-hand calcium-binding domain. 482 494 IPR018247 -
Apr9g0673 502 Gene3D Transferase(Phosphotransferase) domain 1 151 327 - -
Apr9g0673 502 Gene3D Phosphorylase Kinase; domain 1 67 150 - -
Apr9g0673 502 ProSitePatterns EF-hand calcium-binding domain. 411 423 IPR018247 -
Apr9g0673 502 PANTHER SERINE/THREONINE-PROTEIN KINASE 28 501 - -
Apr9g0673 502 ProSitePatterns EF-hand calcium-binding domain. 375 387 IPR018247 -
Apr9g0673 502 ProSitePatterns Protein kinases ATP-binding region signature. 71 94 IPR017441 GO:0005524
Apr9g0673 502 Pfam EF-hand domain pair 438 499 IPR002048 GO:0005509
Apr9g0673 502 Pfam EF-hand domain pair 367 427 IPR002048 GO:0005509
Apr9g0673 502 ProSiteProfiles Protein kinase domain profile. 65 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0673 502 SUPERFAMILY EF-hand 358 498 IPR011992 -
Apr9g0673 502 ProSitePatterns Serine/Threonine protein kinases active-site signature. 185 197 IPR008271 GO:0004672|GO:0006468
Apr9g0673 502 SMART efh_1 402 430 IPR002048 GO:0005509
Apr9g0673 502 SMART efh_1 438 466 IPR002048 GO:0005509
Apr9g0673 502 SMART efh_1 473 501 IPR002048 GO:0005509
Apr9g0673 502 SMART efh_1 366 394 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0673 Apr-Chr9 11010791 11014500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0673 26 501 EF-hand Containing Proteins AT4G04720 60.451 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Apr9g0673 Pkinase 5.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0673 K13412 - gmx:100792610 706.442