Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0658 ATGGCTCAGACTACACCGAATCACACACTCACCGTATCTGGCTGGGCAGCTCATGATCCTTCTGGCAAGATTACTCCATACACCTTCAAAAGAAGGGAGAATGGCCCTCACGATGTGAGCATAAAGATATTGTACTGTGGGATTTGCCACACAGATATCCACCACGTTAAAAATGACTGGGGCATCACTATGTATCCTGTGGTACCTGGGCACGAGATTGTTGGAGAGATTACTAAGGTGGGGAGTGATGTGAAGGGGTTCAATGAAGGAGACAGAGTGGGTGTGGGGTGTTTGGCAGCCACGTGTTTGGACTGTGAGCAGTGCAAGAACGATCAGGAAAACTATTGCGAAAAGTTACAATTCACTTACAACGGCATTTTCTGGGATGGCAGCATCACTTATGGTGGCTACTCCGAAACGCTCGTCGCTGATTACAGGTATGTGGTACACATTCCGGCAAACCTACCATTGGATGCAACAGCACCTCTACTCTGTGCGGGTATAACAGTGTTCAGTCCATTGAAAGACCACGATTTGGTAGCAACACCGGGGAAAAAGATTGGGGTAGTTGGTTTGGGAGGCCTTGGACATATAGCAGTCAAATTTGGCAAGGCATTTGGCCACCATGTTACCGTCATCAGCACTTCGCCCTCCAAAGAAGCTGAAGCTAAGGAGCGTTTGGGTGCTGATGATTTCATAATCAGCTCTAACCCTAAACAATTACAGGCTGCAAGGAAAAGCCTAGATTTTATATTGGACACTGTATCCGCAGAGCACTCTCTTTTGACTGTCTTGGAATTGCTCAAAGTAAATGGGACCTTATTTATCGTGGGGGCACCGGACAAGCCATTCCAGTTGCCTGCTTTCCCATTGTTATTTGGAAAAAGATCGGTGAAAGGTGGCATCATTGGAGGAATAAAAGAGACGCAGGAAATGTTGGACGTTTGCGGGAAGTACAATATCACGAGCGACATTGAGTTAGTTACGCCAGACAGAATCAATGAGGCTTTGGAGCGCCTTGCTAAGAATGATGTTCGCTACCGTTTCGTCATTGACATTGCTGGCAGTTCAAAGATCTAG 1080 0.4676 MAQTTPNHTLTVSGWAAHDPSGKITPYTFKRRENGPHDVSIKILYCGICHTDIHHVKNDWGITMYPVVPGHEIVGEITKVGSDVKGFNEGDRVGVGCLAATCLDCEQCKNDQENYCEKLQFTYNGIFWDGSITYGGYSETLVADYRYVVHIPANLPLDATAPLLCAGITVFSPLKDHDLVATPGKKIGVVGLGGLGHIAVKFGKAFGHHVTVISTSPSKEAEAKERLGADDFIISSNPKQLQAARKSLDFILDTVSAEHSLLTVLELLKVNGTLFIVGAPDKPFQLPAFPLLFGKRSVKGGIIGGIKETQEMLDVCGKYNITSDIELVTPDRINEALERLAKNDVRYRFVIDIAGSSKI* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0658 359 Pfam Alcohol dehydrogenase GroES-like domain 36 150 IPR013154 -
Apr9g0658 359 Gene3D - 166 323 - -
Apr9g0658 359 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Apr9g0658 359 Pfam Zinc-binding dehydrogenase 194 315 IPR013149 -
Apr9g0658 359 SUPERFAMILY GroES-like 17 177 IPR011032 -
Apr9g0658 359 CDD CAD1 14 352 - -
Apr9g0658 359 PANTHER ALDEHYDE REDUCTASE 1 356 - -
Apr9g0658 359 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED 1 356 - -
Apr9g0658 359 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 155 321 IPR036291 -
Apr9g0658 359 SMART PKS_ER_names_mod 22 351 IPR020843 GO:0016491
Apr9g0658 359 Gene3D - 15 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0658 Apr-Chr9 10778048 10781746 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0658 14 356 Monolignol Biosynthesis Gene Families AT2G21730 57.558 1.00e-141 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0658 K00083 - gmx:100820588 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0658 9 10778048 10781746 Apr9g0658 9 10778048 10781746 ECH