Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0645 ATGGCTGAACTTGAGTTCGAGTTAGCCTCTGATTCGCGCTTTCAAAATGGCGTAACGTCTAAAACGGACCGACCAACTAAAACTGAGAGTGTTTCGTTTTTTGGCTTGTTTTCCGCGGCTGATGCTACTGACTATGTTTTGATGTTCCTCGGAAGTGTTGGTTCGTGCGTCCATGGTGCGGCTCTTCCCGTTTTCTTCGTTTTGTTTGGTCGCATGATTGATTCTTTGGGACATCTTGCTTCTAACCCTCACAAATTGACCTCACGAATTTCTGAGCATGCTATGTATTTGGTCTATCTTGGACTGGTTGTTTTGGTATCGGCTTGGATGGGTGTTGCTTTTTGGATGCAAACGGGGGAGAGGCAAACGGCTCGATTGCGCTTGAAATATTTGCAATCAGTGCTAAAGAAGGATATTAATTTCTTTGACAATGAAGCCAGGGATGCCAACATCATTTTCCACATCTCGAGTGACGCGATATTGGTACAAGATGCAATTGGTGACAAGACAGGCCATGCCATGCGTTATCTTTCTCAGTTTCTTGTTGGATTTGCCATTGGATTTACATCAGTGTGGCAGCTCACACTACTCACCTTGGCTGTGGTTCCATTGATAGCTGTAGCCGGGGGAGGTTACACTATAATTATGTCTACTTTATCAGAAAAGGGTGAAGCAGCTTATGCTGAAGCTGGGAAGGTTGCAGAAGAGGTAATTTCTCAAGTGCGTACTGTTTACTCATTTGTAGGAGAAGAGAAAGCGATTGGTTCATACTCCAAGTCTCTTGATAATGCTTTGAAGCTTGGGAAGAAGAGTGGTATTGCAAAAGGAGTTGGAGTAGGGTTCACATATGGGCTATTGTTTTGTGCTTGGGCATTGCTTCTATGGTATGCTGGCATACTTGTCAGGCATAATAAAACAAATGGAGGGAAAGCGTTCACAACAATTATCAATGTCATCTTTAGTGGATTTGCTCTTGGTCAAGCAGCTCCAAACCTTGGTTCCATTGCTAAAGGGCGTGCGGCTGCAGCCAATATCATGAACATGATTGCATCCGCTTCAGGCAGTTCTAAAAGGTTGGATGATGGCACTGTTGTGCCACAAGTTGTAGGGGAAATTGAATTTTGTGAGGTGTGCTTTGCTTACCCGTCAAGATCCAATATGGTCTTCCAAAATTTGAGCTTCTCAGTGAGTGCTGGGAAGACTGTAGCAGTTGTTGGTCCTAGTGGTTCCGGAAAGAGCACAATCATTTCCCTTCTTCAACGGTTCTATGACCCCACTTCAGGTAAGATCCTGTTGGATGGATATGACCTAAAGAATCTTCAATTGAAATGGTTGAGAGAACAGATGGGCTTGGTTAGTCAAGAACCAGCACTATTTGCCACAACAATAGCTGGAAATATTTTGTTTGGAAAAGAAGATGCAGACATGGATAAAGTCATACAAGCTGCCATGGCTGCAAATGCTCATTCCTTCATCCAAGGATTACCTGATGGTTATCAGACTCAGGTAGGAGAGGGTGGCACCCAACTTTCAGGGGGGCAAAAACAAAGAATTGCCATAGCAAGAGCAGTGCTAAGGAACCCAAAAATATTGCTTTTAGATGAGGCCACAAGTGCTTTGGATGCGGAATCAGAACTCATTGTTCAGCAAGCATTGGAAAAGATAATGTCAAATAGGACAACAATAATTGTTGCACATAGATTATCCACCATACGTGATGTAGATACAATTGTTGTGTTGAAGAATGGTCAGGTAGTTGAAAGTGGGACTCATTTGGAATTGATGTCCAACAATGGTGAGTATATGAATCTGGTGAGTTTGCAGGTATCACAAAACCTCACAAACTCTAGATCAATATCTCGCTCTGAAAGTTCAAGACATTCTAGTTTTCGAGAACCTTTAGACAACATGACCTTAGAAGAGCAATTGAGGATGGATACAGAAAAAGAACTGCAATCAAGTGATAAAGGCTTGCCATCAAACACTGCTTCAGTTCCATCAATTTTAGACTTATTGAAACTGAATTCTCCAGAGTGGCCCTATGCAATACTTGGGTCAGCAGGTGCAGTTTTGGCAGGCATGGAAGCTCCTCTCTTTGCCCTTGGAATCACTCACATTTTGACTGCATTTTACTCTCCTTTTGGTTCTAAAATCAAGCAAGAGGTTGATCGTGTAACTTTTGTATTTATTGGACTGGCTGTTGTTACTATACCCATTTATCTGTTGCAACACTACTTTTACACATTGATGGGAGAACGTCTGACTGCCCGTGTGCGTTTATTTATGTTCTCAGCTATTCTTACCAATGAGGTTGCGTGGTTTGATTTGGATGAGAACAACACTGGTTCTCTAACTGCCATGCTAGCTGCGGATGCAACATTAGTAAGAAGTGCTCTAGCTGATAGGCTCTCAACCATTGTGCAAAATGTAGCACTCACTGTAACAGCATTTGTTATTGCCTTCACATTGAATTGGCAACTAACAGCAGTGGTTGTAGCCTGTTTTCCCCTTCTCATAGGAGCTTCTATTACAGAGCAACTATTTCTCAAAGGGTTTGGAGGAGATTATGGCCATGCTTATTCTAAGGCAACTTCTTTGGCTCGTGAAGCTATTGCCAACATACGCACTGTTGCTGCTTTTGGTGCAGAAGATCGAATCTCAATACAATTTGCCTCTGAATTGAACAAACCAAACAAGCAAGCACTTCTACGGGGCCACATATCAGGTTTTGGCTATGGCATAGCACAGTTGTTTGCTTTCTGCTCCTATGCACTTGGTCTTTGGTATGCATCCATTTTAATCAAGAAAACCGAGTCGAATTTTGGAAACATCATGAAGTCCTTCATGGTCTTGATCGTCACTGCTCTAGCAATAGCAGAAACACTAGCTCTTACACCGGACATTGTGAAGGGATCACAAGCACTGGGATCAGTTTTTGGCATTCTCCAAAGGAGAACAGCCATCAACCCAGACGACCCCAACTCAAAGAAGGTAACTGATATCAAGGGAGAGATAGAGTTTAGAAATGTGTGCTTCAAGTACCCAATGAGACCTGATATCACCATATTTCAAAGCTTAAACCTCAGGGTCTCAGCAGGTAAGAGTCTTGCAGTTGTGGGCCAAAGTGGTTCAGGGAAAAGTACGGTGATTTCTCTGGTAATGAGATTTTATGACCCCACTTCTGGCTTAGTTCTGATAGATGAATGTGATATCAAAAGCCTAAACTTGAGATCCTTAAGGCTGAGAATAGGATTGGTTCAGCAAGAACCTGCTTTGTTCTCTACTACAGTTTATGAAAACATAAAGTATGGAAACGAGGAGGCATCAGAAATAGAGGTAATGAAGGCAGCGAAAGCAGCCAATGCTCATGAATTCATAAGCAGAATGCCAGAAGGGTACAAAACTGAGGTTGGTGAGAGAGGGGTGCAGTTATCAGGTGGACAAAAACAAAGAGTGGCAATTGCTAGAGCTATTCTGAAAGATCCATCCATTCTTCTGTTGGATGAAGCAACGAGTGCATTGGATACAGTATCAGAGAGGCTGGTCCAAGAGGCTCTTGATAAACTTATGGAAGGTAGAACAACAATTTTGGTAGCTCACAGGTTGTCCACTGTTCGTGATGCAGATAGCATTGCAGTGCTGCAAAATGGGAGGGTTGCTGAAATGGGAAGTCATGAGAGGTTGATGGCCAAACCCCGAAGCATTTATAAGCAATTGGTTAGTCTACAGCAAGAAATGCGTGACCGAGAAGACCATTGA 3759 0.4283 MAELEFELASDSRFQNGVTSKTDRPTKTESVSFFGLFSAADATDYVLMFLGSVGSCVHGAALPVFFVLFGRMIDSLGHLASNPHKLTSRISEHAMYLVYLGLVVLVSAWMGVAFWMQTGERQTARLRLKYLQSVLKKDINFFDNEARDANIIFHISSDAILVQDAIGDKTGHAMRYLSQFLVGFAIGFTSVWQLTLLTLAVVPLIAVAGGGYTIIMSTLSEKGEAAYAEAGKVAEEVISQVRTVYSFVGEEKAIGSYSKSLDNALKLGKKSGIAKGVGVGFTYGLLFCAWALLLWYAGILVRHNKTNGGKAFTTIINVIFSGFALGQAAPNLGSIAKGRAAAANIMNMIASASGSSKRLDDGTVVPQVVGEIEFCEVCFAYPSRSNMVFQNLSFSVSAGKTVAVVGPSGSGKSTIISLLQRFYDPTSGKILLDGYDLKNLQLKWLREQMGLVSQEPALFATTIAGNILFGKEDADMDKVIQAAMAANAHSFIQGLPDGYQTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSALDAESELIVQQALEKIMSNRTTIIVAHRLSTIRDVDTIVVLKNGQVVESGTHLELMSNNGEYMNLVSLQVSQNLTNSRSISRSESSRHSSFREPLDNMTLEEQLRMDTEKELQSSDKGLPSNTASVPSILDLLKLNSPEWPYAILGSAGAVLAGMEAPLFALGITHILTAFYSPFGSKIKQEVDRVTFVFIGLAVVTIPIYLLQHYFYTLMGERLTARVRLFMFSAILTNEVAWFDLDENNTGSLTAMLAADATLVRSALADRLSTIVQNVALTVTAFVIAFTLNWQLTAVVVACFPLLIGASITEQLFLKGFGGDYGHAYSKATSLAREAIANIRTVAAFGAEDRISIQFASELNKPNKQALLRGHISGFGYGIAQLFAFCSYALGLWYASILIKKTESNFGNIMKSFMVLIVTALAIAETLALTPDIVKGSQALGSVFGILQRRTAINPDDPNSKKVTDIKGEIEFRNVCFKYPMRPDITIFQSLNLRVSAGKSLAVVGQSGSGKSTVISLVMRFYDPTSGLVLIDECDIKSLNLRSLRLRIGLVQQEPALFSTTVYENIKYGNEEASEIEVMKAAKAANAHEFISRMPEGYKTEVGERGVQLSGGQKQRVAIARAILKDPSILLLDEATSALDTVSERLVQEALDKLMEGRTTILVAHRLSTVRDADSIAVLQNGRVAEMGSHERLMAKPRSIYKQLVSLQQEMRDREDH* 1253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0645 1252 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 372 607 IPR003439 GO:0005524
Apr9g0645 1252 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 550 1243 IPR039421 -
Apr9g0645 1252 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 454 572 IPR039421 -
Apr9g0645 1252 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 31 473 IPR039421 -
Apr9g0645 1252 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 683 970 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g0645 1252 ProSitePatterns ABC transporters family signature. 1144 1158 IPR017871 GO:0005524
Apr9g0645 1252 CDD ABC_6TM_Pgp_ABCB1_D2_like 672 988 - -
Apr9g0645 1252 MobiDBLite consensus disorder prediction 624 638 - -
Apr9g0645 1252 Gene3D ABC transporter type 1, transmembrane domain 35 974 IPR036640 GO:0005524|GO:0016021
Apr9g0645 1252 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 454 572 - -
Apr9g0645 1252 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 550 1243 - -
Apr9g0645 1252 PANTHER ABC TRANSPORTER B FAMILY MEMBER 13-RELATED 31 473 - -
Apr9g0645 1252 Pfam ABC transporter transmembrane region 688 956 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g0645 1252 Pfam ABC transporter transmembrane region 49 321 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g0645 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 363 608 IPR027417 -
Apr9g0645 1252 Pfam ABC transporter 390 538 IPR003439 GO:0005524
Apr9g0645 1252 Pfam ABC transporter 1024 1172 IPR003439 GO:0005524
Apr9g0645 1252 ProSitePatterns ABC transporters family signature. 510 524 IPR017871 GO:0005524
Apr9g0645 1252 CDD ABC_6TM_Pgp_ABCB1_D1_like 48 345 - -
Apr9g0645 1252 SUPERFAMILY ABC transporter transmembrane region 671 983 IPR036640 GO:0005524|GO:0016021
Apr9g0645 1252 CDD ABC_MTABC3_MDL1_MDL2 372 608 - -
Apr9g0645 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 994 1243 IPR027417 -
Apr9g0645 1252 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 49 337 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Apr9g0645 1252 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1005 1241 IPR003439 GO:0005524
Apr9g0645 1252 CDD ABC_MTABC3_MDL1_MDL2 1005 1243 - -
Apr9g0645 1252 Gene3D - 995 1252 IPR027417 -
Apr9g0645 1252 SMART AAA_5 398 584 IPR003593 -
Apr9g0645 1252 SMART AAA_5 1032 1218 IPR003593 -
Apr9g0645 1252 Gene3D - 362 616 IPR027417 -
Apr9g0645 1252 MobiDBLite consensus disorder prediction 616 638 - -
Apr9g0645 1252 SUPERFAMILY ABC transporter transmembrane region 37 345 IPR036640 GO:0005524|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0645 Apr-Chr9 10488030 10494014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0645 23 1244 Calmodulin-binding Proteins AT2G36910 50.000 0.0 1220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0645 K05658 - gmx:100787093 2180.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0645 9 10488030 10494014 Apr9g0645 9 10488030 10494014 ECH