Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0643 ATGACTCTTGAAGATTTTTTTACGTTGACTGAAATGAAAGATGGGCTCACAGCCCCTTCTCGAGTACAGGAGTTGGTTTCTGTAATGCAGAATGAGCAAGATTGTGTAGTTAAGAATGCTGGTGATGCAACAAGGCAGTGGGCTGCTGTTGCAAGCACCATTGCTGCTACAGAGAATAAAGATTGTCTTGATCTTTTTATTCAATTAGATGGACTTTGGTACATCAATAGGTGGTTAAATGACGCTCAGAATTTGGGTACTGATACAAATGATGGCTTCATTGAAGAGTCAATTACTGCAATGTTGCGAGCAGTTGAAAAACTATATCTAGACAGGGAGAAGTCAATTTCATCTGGAATTCGGGTAACTGTAAGTAAACTTCTTGGCCATCATAGCTCCAAGGTTCAGGATAGAGCAAGAGTATTATTTGACAGCTGGAAAGGAGACAGGGATGGAGAGGCTGAACCTCATGATGATACAAATCTTGGTAGAATCAACAGTGTGAGTGATAAGATTGTTGGGCTGGAAGGCCAGCCATCTTCTGTGAATGAAGCCGGCAATGCCGATGATCACGCATCTCGACTTACTGGAGGTGAGAAGACTCAATTGAGAAACTGTGATAGTCAGCTACATGAAAAAGTTTCAACCATGCAGATAGAAAGTTTGGACAATGCACTCCAGCCCTCTGTAAGTTTGGATTGTGAAGATATCAAAGAGAGATCAAACCATGTTGATAGTGTTTTGATATCTGTTCAAGAAGTTGCTACCATGAATGAAGGTGAGGACACATTGGCTGGGACATGTAACTTACCTGTTACTAAACAAGGCAGTTTCAAAGGTCAACTAGATGACATACGGTTAAATGAATCATCCAAAAAGGAGAAGCAAAATCAAAATGTTAATGGTCCTCCTGAAGAGTTAGGAGCACCAGATATCTCTTCAGCATCTGCAAAGCTGGAGCCTGAACCTGTTTCCGTTGGTGATATTAAAGCAAAAGTGCTGGAATCTGTGAAAGAACCTGTTTTAGAACATAATGTTGAAAGCAATGAAGATGTTTGTCATAAAGTAATTGATTCTGGTAGCACGAGATCACCTGCATCTGATGGGACAAGTGGGGGGAATGATGTCAGAGCTATAAATTCAAGCAATCCACAAATTTTGAAAGCATTAGAAAATGATGATGACCATTGTTCTAATGCATTACAGGACTCATCAGTCAGTGGCAGTAACTTGGAAAAGCCTGACATGTTGGAGATGTCTTTCCCCAAAGCAGAATATGTTAGAGCAGTAAAGGAAGACAAGGATCGTGTTTCTGATCAAGGTGATGATACCTCAAATGGTTCTGCTTCTTTTAAATGGGGTAAAGGTCCGAGAAGCCCTAACATTATTGACAAGAGTTCTGACATGGAGCTTGAGTATGGTATTGTTGATGCTTTAGAACTCGCTCGACAAGTTGCCCAAGAAGTTGAGAGAGAATATGTCACAGTAAAGGAAGGGAAGGACCAGGTTTCTAATCAAGGCGACAACACCACAAATGGTTCTGATTCTTTTAAGCGGGGAAAAGGTTCCAGAAGCCCTAATGTTATTGACAAGAGTTCTGATATTGAACTTGAATATGGTATAGTTGATGCTTTAGAAGTCGCTCGACAAGTTGCTCAAGAGGTTGAGAGAGAAGTTTGCAGCTCTTCTTCAGAGAAAATCTCCGAAGGGGGAATCAGGCAGGCAGGCAGCCATGATAAGGATGAACTCACTCATGTCCTACCTGAGGAGGTATCATCCAGGCAAAGCAATTCTACTGAAGCATGTTCTGTAGAGGAGGGGCATATGAGTGTTTCAGATAATATTGAGGCTGGGCCACAATGCATACCTGACTTGGAGTCCTCACAGGTGACTGAAGCAGCTCAAGATGCAGGAGATAATTCAGAGAAAAGCCTCTGTACCTTTGATCTCAATCTCAATGAAGTTGGTTCTGATGATATGGATGTTTCTGTAAATGCTATGTCTACTGCACCAATACCTGTTGTCTCTGCTTCAAAACTTGCACAGATTTCTGGCTTCCCCCCAGCCCCTTTGCAGTTTGAGGGGACCCTTGGGTGGAAAGGATCAGCTGCCACCAGTGCCTTTCGTCCTGCATCACCTCGCAAAAATTCTGATAACGAGAAAAATGTTTCTGTTGGTGGAAACTCTAATATTTCCAAGCAGAGGCAGGGTTGCCTTGACATTGATCTGAATGTGGCTGAGGGTGAAGAAGGATTGGTAAAACAAATTGGTGAATCTTCAGGCCTTCCTTCTGGGCAATCATCCGTGGAACTTAGTCCTAAAAGGTCAAGCAGGTTCGATTTGGATTTAAACAGTATTGGTGATGATGGTGATGCCCAACCCTCAGATCAGCGGATGGAGGGGCAGCTCTTTTCTGGAAGAAATGGCTATTGGAGCCCCTCACCTGCATCATCGTCATCATCAATGCAACCTTCAGTTCGAAACATTGATTTGAATGACAGACCATACTTCCAAACTGATTTGGTGGAGCAAGGGCATAGCAAGTCATCTTCAATTATTGAAGCAAATAAACTTTCTAAATCAGATGCTCCTGTGATCTCTCTTTTGGGGGCCAAGGTGGAAGTTGGTAGAAGAGAATATGTTCCTCAAAATTGGTCTTTGCCAAATGGCAAGGCTATTGAGCCTTCAATGGATCTTACAATGTCAGGAGGTGGTGGCATTTTGGGAATGGGCCCCACAGTATCCTACAATCGTTCAAGTGTTTTTGGGTATAATGGACTGACACCAGCTCCTGGTTTGTCTTTTTCAGGAGCTCCAGTTGTGCCTCAAGTGGGGGGATCATCCTCAACCGACCTGTCATCTTATACTCAGCCTCCATTTATCATGAGCATGGCTGGTACACAACTTGGTTTAAATGGAGTTGGATCTTCACGTCCCAACTTTGATCTAAACTCTGGCTTCGTGATTGATGGTGGGAATAGAGACGCATTGGCTGCAAGGCAATTTTTCTTTCCTGCTCAAGGTAGAGGAGCTATGGAGGAGCATGTAAGGACCTTTCCACAATCCTCAAGTTCTGGAGTTGGTGTGAAAAGAAAAGAACCGGACGGTGGCTGGGAAACCTATCCGTTCAGCTACAAAAATCAGCAACCTCCATGGAAGTAG 3162 0.4314 MTLEDFFTLTEMKDGLTAPSRVQELVSVMQNEQDCVVKNAGDATRQWAAVASTIAATENKDCLDLFIQLDGLWYINRWLNDAQNLGTDTNDGFIEESITAMLRAVEKLYLDREKSISSGIRVTVSKLLGHHSSKVQDRARVLFDSWKGDRDGEAEPHDDTNLGRINSVSDKIVGLEGQPSSVNEAGNADDHASRLTGGEKTQLRNCDSQLHEKVSTMQIESLDNALQPSVSLDCEDIKERSNHVDSVLISVQEVATMNEGEDTLAGTCNLPVTKQGSFKGQLDDIRLNESSKKEKQNQNVNGPPEELGAPDISSASAKLEPEPVSVGDIKAKVLESVKEPVLEHNVESNEDVCHKVIDSGSTRSPASDGTSGGNDVRAINSSNPQILKALENDDDHCSNALQDSSVSGSNLEKPDMLEMSFPKAEYVRAVKEDKDRVSDQGDDTSNGSASFKWGKGPRSPNIIDKSSDMELEYGIVDALELARQVAQEVEREYVTVKEGKDQVSNQGDNTTNGSDSFKRGKGSRSPNVIDKSSDIELEYGIVDALEVARQVAQEVEREVCSSSSEKISEGGIRQAGSHDKDELTHVLPEEVSSRQSNSTEACSVEEGHMSVSDNIEAGPQCIPDLESSQVTEAAQDAGDNSEKSLCTFDLNLNEVGSDDMDVSVNAMSTAPIPVVSASKLAQISGFPPAPLQFEGTLGWKGSAATSAFRPASPRKNSDNEKNVSVGGNSNISKQRQGCLDIDLNVAEGEEGLVKQIGESSGLPSGQSSVELSPKRSSRFDLDLNSIGDDGDAQPSDQRMEGQLFSGRNGYWSPSPASSSSSMQPSVRNIDLNDRPYFQTDLVEQGHSKSSSIIEANKLSKSDAPVISLLGAKVEVGRREYVPQNWSLPNGKAIEPSMDLTMSGGGGILGMGPTVSYNRSSVFGYNGLTPAPGLSFSGAPVVPQVGGSSSTDLSSYTQPPFIMSMAGTQLGLNGVGSSRPNFDLNSGFVIDGGNRDALAARQFFFPAQGRGAMEEHVRTFPQSSSSGVGVKRKEPDGGWETYPFSYKNQQPPWK* 1054
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0643 1053 MobiDBLite consensus disorder prediction 432 464 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 709 731 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 756 824 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 178 201 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 499 529 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 1018 1053 - -
Apr9g0643 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 1 498 - -
Apr9g0643 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN 497 1053 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 357 379 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 798 824 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 360 379 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 496 529 - -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 759 774 - -
Apr9g0643 1053 ProSiteProfiles TFIIS N-terminal domain profile. 73 153 IPR017923 -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 704 731 - -
Apr9g0643 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 497 1053 - -
Apr9g0643 1053 PANTHER TRANSCRIPTION ELONGATION FACTOR (TFIIS) FAMILY PROTEIN-RELATED 1 498 - -
Apr9g0643 1053 SUPERFAMILY Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 61 160 IPR035441 -
Apr9g0643 1053 MobiDBLite consensus disorder prediction 289 323 - -
Apr9g0643 1053 Gene3D Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 17 149 IPR035441 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0643 Apr-Chr9 10442150 10448833 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR IWS1 Apr9g0643 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0643 - - gmx:102667261 1546.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0643 9 10442150 10448833 Apr9g0643 9 10442150 10448833 ECH