Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0601 ATGGCTCCTGCATGGGTTGAAGAGTTGCATCTTCATCACGTGACCATTCCTGTGACCATAGATAAAATGTATTCAGTCATGCCATCAACACCTATTCCAGTTAAACAAGGTGAAAGCTTATACCTTTCCAACCTAGATGACATGATTGGAGCACGTGTGTTTACACCTACAGTGTACTTTTATCAATCAGAAAACATAGATCCTTCTAAAAAACCTATAACAAAAATACTACGTTATGCTTTAGGTGATGTTTTAGTGCCTTACTACCCTCTCTCTGGCAGACTTAGAGAGACCAAGAATGGAAAACTACAAGTGTTTTTTGGACCCAAACAAGGAGCACTTATGGTTGAAGCACGATCTGATATTGCCTTAGTTGAACTAGGAGATCTCACAGCTCCAAACCCATCTTGGGAACCTTTGATCTTCAAGTTTCCAAATGAAGAACAATACAAAGTGCTTGATATGCCATTGGTCATTGCTCAAGTTACCCTTTTCCGTTGTGGTGGCTTTAGCATTGGTTTGAGGCTATGCCATTGCATCTGTGATGGCTTGGGAGCCATGCAATTCCTTGGTGCATGGGCTGCCACTGCAAGAACAGGAACACTTGTGATTGATCCTAAGCCTTGTTGGGACAGGGAAATGTTTAGGCCTCGTGACCCACCTATGGTGACGTTTCCCCACATGGAGTTCATGAGAATTGAAGAGGGTTCCAATCTCACAATGACATTGTGGCAAACCAAGCCAGTTCAAAAGTGTTATAGGATCAAGCGTGAGTTTCAAAATTGTGTTAAAACTCTAGCTCAGCCATTTGATGCTGCTGGTTGTACCACTTTTGATGCAATGGCAGCACTTATTTGGAGATCTTGGGTGAAAGCCCTTGATGTAAGGCCACTTGATTACCATCTTAGGCTAACATTTTCAGTCAATGCTCGTCAAAAGCTTAAAAACCCACCTTTGAGAGAAGGATTTTATGGCAATGTTGTATGTGTAGCATGTACAACAAGCACTGTCTCAGACCTTGTGCATGGACAACTTCCAAAAACTACTCGTTTGGTTCGTGAGGCAAGACAAAGTGTTTCAGAGGAGTATTTGAGATCCACAGTGGATTATGTTGAGTTGGATAGGCCTAGGCAACTTGAGTTTGGTGGTAAACTAACAATAACTCAATGGACAAGGTTCTCAATCTACAAGTGTGCAGATTTTGGGTGGGGTAGGCCACTTTATGCTGGTCCTATAGATTTAACACCAACACCTCAAGTTTGTGTTTTTCTACCTGAAGGGGAGGCTGATTGTAGTGGCTCTATGATTGTGTGCATATGTTTGCCTGACTCTGCTTCTCACAAGTTTACACAAGCCTTGTTGCTTGATTCAATGTTCACATAA 1383 0.4215 MAPAWVEELHLHHVTIPVTIDKMYSVMPSTPIPVKQGESLYLSNLDDMIGARVFTPTVYFYQSENIDPSKKPITKILRYALGDVLVPYYPLSGRLRETKNGKLQVFFGPKQGALMVEARSDIALVELGDLTAPNPSWEPLIFKFPNEEQYKVLDMPLVIAQVTLFRCGGFSIGLRLCHCICDGLGAMQFLGAWAATARTGTLVIDPKPCWDREMFRPRDPPMVTFPHMEFMRIEEGSNLTMTLWQTKPVQKCYRIKREFQNCVKTLAQPFDAAGCTTFDAMAALIWRSWVKALDVRPLDYHLRLTFSVNARQKLKNPPLREGFYGNVVCVACTTSTVSDLVHGQLPKTTRLVREARQSVSEEYLRSTVDYVELDRPRQLEFGGKLTITQWTRFSIYKCADFGWGRPLYAGPIDLTPTPQVCVFLPEGEADCSGSMIVCICLPDSASHKFTQALLLDSMFT* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0601 460 Pfam Transferase family 17 451 - -
Apr9g0601 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 12 455 - -
Apr9g0601 460 PANTHER F21B7.2 12 455 - -
Apr9g0601 460 Gene3D - 238 453 IPR023213 -
Apr9g0601 460 Gene3D - 15 232 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0601 Apr-Chr9 9185104 9186486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0601 18 454 Monolignol Biosynthesis Gene Families AT5G48930 29.075 3.57e-50 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0601 K15400 - gmx:100802814 826.239