Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0587 ATGGACGGGAACAAGGACGACGCGTTGAAATGCTTGAAAATCGGCAAAGAGGCGTTAGAAAACGGCGATCGGACACGAGCGTTGAAGTTCGTGACGAAAGCTCGCCGCCTCGACCCCACCCTTCCCGTCGACGATCTATTGTCTGCGATAGAGAAGGACACAGGGGATCCGCCCCCTGCTGCCGCCTACGCGGAGCCCACAAAGGGCCCCGATCAGCCCTCTATCCGTCGAAGGGCTGCGACGGTGCCATCGTCGTCCTCATCATCCTCATCGGTCACATATACCGAAGAGCAAATTTCAATTATCCGAGAGATTAAGAGGAAGAAGAACTATTATGAGATATTGGGATTGGAGAAAAGTTGCACTGTTGAGGATGTGAGGAAGTCTTATAGGAAACTGTCTCTGAAGGTTCATCCCGACAAGAACAAAGCCCCGGGCGCCGAGGAAGCGTTCAAGGCTGTGTCGAAGGCGTTTCAGTGTCTTAGCAATGATGAGAGTCGGAGGAAGTATGATCTTTCGGGGGAGGATGAATTGGTTTACGAGCAGCGAGCGGCGAGGCCTGCGGCGAGGGGTTTTAATGGTTATTATGAGGCTGATATTGATGCTGAGGAGATATTTAGGAACTTTTTCTTTGGAGGAATGGCTCCAGCAGCTAACTTTGGTGGATTCAGTTTTGGGCCTGGGATGGCCCATAGGCCTGCTGAACCTGGCTCTGGTGGCTTTAATGTTCGCGCTTTAATTCAGTTGCTTCCGGTTCTGCTCATTTTGCTAGTCAACTTTTTGCCTTCGTCGGATCCTATATATGTGCTTTCGCAGAATTATCCTTATGAACACCGTTTGACTACGCCCAAGGGTGTTAACTATTATGTTAAGTCTGCAAAATTTTCTCAGGAGTATCCACCGGGGAGCAATGAGCTTGCGGCAATTGAAGAAAGGGTTGAAAGGGAGTACTTCAGCGTTCTCCGCCAGAACTGTCATTTTGAGTTGCAGCGTCGCCAGTGGGGTTATATCCGGGAAACACCGCACTGCGATATGCTTCGGAAGTTTGGGGCGGCGAATTGA 1062 0.5047 MDGNKDDALKCLKIGKEALENGDRTRALKFVTKARRLDPTLPVDDLLSAIEKDTGDPPPAAAYAEPTKGPDQPSIRRRAATVPSSSSSSSSVTYTEEQISIIREIKRKKNYYEILGLEKSCTVEDVRKSYRKLSLKVHPDKNKAPGAEEAFKAVSKAFQCLSNDESRRKYDLSGEDELVYEQRAARPAARGFNGYYEADIDAEEIFRNFFFGGMAPAANFGGFSFGPGMAHRPAEPGSGGFNVRALIQLLPVLLILLVNFLPSSDPIYVLSQNYPYEHRLTTPKGVNYYVKSAKFSQEYPPGSNELAAIEERVEREYFSVLRQNCHFELQRRQWGYIRETPHCDMLRKFGAAN* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0587 353 Pfam Domain of unknown function (DUF1977) 261 333 IPR015399 -
Apr9g0587 353 SUPERFAMILY Chaperone J-domain 106 225 IPR036869 -
Apr9g0587 353 PANTHER - 1 352 - -
Apr9g0587 353 CDD DnaJ 110 163 IPR001623 -
Apr9g0587 353 ProSiteProfiles dnaJ domain profile. 110 174 IPR001623 -
Apr9g0587 353 SMART dnaj_3 109 166 IPR001623 -
Apr9g0587 353 ProSitePatterns Nt-dnaJ domain signature. 151 170 IPR018253 -
Apr9g0587 353 PRINTS DnaJ domain signature 112 130 IPR001623 -
Apr9g0587 353 PRINTS DnaJ domain signature 130 145 IPR001623 -
Apr9g0587 353 PRINTS DnaJ domain signature 146 166 IPR001623 -
Apr9g0587 353 PRINTS DnaJ domain signature 166 185 IPR001623 -
Apr9g0587 353 Gene3D DnaJ domain 106 219 IPR036869 -
Apr9g0587 353 Pfam DnaJ domain 110 171 IPR001623 -
Apr9g0587 353 MobiDBLite consensus disorder prediction 47 90 - -
Apr9g0587 353 PANTHER AT29763P-RELATED 1 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0587 Apr-Chr9 8788370 8790191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0587 105 182 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 37.805 5.63e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0587 K09518 - gmx:100788812 565.074