LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr9g0584	ATGGCTTCTGTTTTGAAGAGGCTTGCAAGAGCCACTCCCATTGCATTGTCGAGTGGCTTCGTTGCCAAATCGAATTCCTCTCACAATCACAAATACAGTAATTTCCGGTTACCATTCACTACTATAGCTGCCATTTCCGGTGGAGCCTCCTTCTTCTATTGCCTTTCCTCACCAAACCTGGTTCATTTAGAACAAGTGAAAGAAGAGAATAGTAGAGATATCGCTCTGAGTCCTGATAAATGGATCAAATTTAAGTTGCAAGACACTGCTAGGGTCAGTCACAATACACAGTTATTCAGGTTTTCATTTGATCCCACTAAGACATTGGGTTTGGATGTTTCATCTTGCATTATTACAAGAGCACCATTGGGACAAGATGCTGAAGGAAAACCAAAATACGTGATACGCCCGTATACTCCCATATCCGATCCAGAATCTAAGGGACACTTTGATTTGTTAATCAAGGTGTATCCTGAAGGAAAAATGAGCCAGCATTTTGCAAGCTTAAAGCCAGGTGATGTTGTTGAGGTGAAAGGGCCCATTGAAAAGCTCAGATATAGTCCTAATATGAAGAAACATATTGGCATGATTGCTGGTGGAACAGGAATTACTCCAATGCTTCAGGTGATTGAAGCAATATTGAAGAATCCTAATGACAAAACTCAGATATCATTGCTTTATGCTAATGTCTCCCCAGATGACATATTGCTTAAACAGAAGCTTGACATTCTAGCAGCTAGCCATCCAAACTTAAAGATATTTTACACTGTAGATAATCCAACAAAAAATTGGAGAGGAGGTGCAGGTTTCATATCAAAGGATATGGTTGAGAAAGGCTTACATGGTCCTTGTGATGATACTATTGTGCTTGTTTGTGGCCCCCCTGGGATGATGAAACATATATCTGGGGACAAGGCTAAAGACCGGTCACAAGGAGAGCTTAGTGGCATACTGAAAGAGCTTGGATACACTGAGCAAATGGTTTACAAATTTTAA	996	0.4056	MASVLKRLARATPIALSSGFVAKSNSSHNHKYSNFRLPFTTIAAISGGASFFYCLSSPNLVHLEQVKEENSRDIALSPDKWIKFKLQDTARVSHNTQLFRFSFDPTKTLGLDVSSCIITRAPLGQDAEGKPKYVIRPYTPISDPESKGHFDLLIKVYPEGKMSQHFASLKPGDVVEVKGPIEKLRYSPNMKKHIGMIAGGTGITPMLQVIEAILKNPNDKTQISLLYANVSPDDILLKQKLDILAASHPNLKIFYTVDNPTKNWRGGAGFISKDMVEKGLHGPCDDTIVLVCGPPGMMKHISGDKAKDRSQGELSGILKELGYTEQMVYKF*	332

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr9g0584	331	SUPERFAMILY	Riboflavin synthase domain-like	73	189	IPR017938	-
	Apr9g0584	331	Gene3D	Translation factors	74	177	-	-
	Apr9g0584	331	PANTHER	NADH-CYTOCHROME B5 REDUCTASE-LIKE	46	331	-	-
	Apr9g0584	331	Gene3D	-	178	331	IPR039261	-
	Apr9g0584	331	Pfam	Oxidoreductase NAD-binding domain	196	302	IPR001433	GO:0016491
	Apr9g0584	331	ProSiteProfiles	Ferredoxin reductase-type FAD binding domain profile.	79	187	IPR017927	GO:0016491
	Apr9g0584	331	CDD	cyt_b5_reduct_like	84	331	-	-
	Apr9g0584	331	SUPERFAMILY	Ferredoxin reductase-like, C-terminal NADP-linked domain	174	324	IPR039261	-
	Apr9g0584	331	PRINTS	Cytochrome B5 reductase signature	136	143	-	-
	Apr9g0584	331	PRINTS	Cytochrome B5 reductase signature	172	186	-	-
	Apr9g0584	331	PRINTS	Cytochrome B5 reductase signature	195	214	-	-
	Apr9g0584	331	PRINTS	Cytochrome B5 reductase signature	233	244	-	-
	Apr9g0584	331	PRINTS	Cytochrome B5 reductase signature	288	296	-	-
	Apr9g0584	331	PANTHER	NADH-CYTOCHROME B5 REDUCTASE	46	331	IPR001834	GO:0016491
	Apr9g0584	331	Pfam	Oxidoreductase FAD-binding domain	84	186	IPR008333	-
	Apr9g0584	331	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	136	143	IPR001709	GO:0016491
	Apr9g0584	331	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	195	214	IPR001709	GO:0016491
	Apr9g0584	331	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	233	244	IPR001709	GO:0016491
	Apr9g0584	331	PRINTS	Flavoprotein pyridine nucleotide cytochrome reductase signature	288	296	IPR001709	GO:0016491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr9g0584	Apr-Chr9	8642003	8659377	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr9g0584	72	331	NADPH P450 reductases	AT5G17770	41.825	3.31e-66	208

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr9g0584	K00326		-	jre:109006259	537.339