Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0578 ATGTCACATTCAAGCATATATGAAGGTAGTGCCATAGATGAAGAAGAAATGGGTGATGAAGAGATAGATGACGAAGAATTTTATGAAGCCATGTACGCATGTATAATGGCTTTGAATATGATAGCACCTACTTTGATGGCTAAACCAGGATCAGCTATGGCAGCTAAAATTAAAAAAAGCTCAAGGTTCTTCCCTTTCTTCAAGGATTGCATTGAAGCTATTGACATGACACATATTCTAACAATGGTGAGGGAGCAAGATTGGGTGGGAGGGACTCATGATTCTAAGCTACTAAATGTTGCTATAACAAGGAGGAATGGACTTAAAGTGGCTCAAGTATGCTCGTGGAGGATGAGGAAGTTAAGAACTGGAACCTTGTTGCATGGTGTTCTTCGCGTTACAATATTTGAGGTTGATAAGTTTTATCGTAATGATTGCTGCAATTGTTTCCCTAAGGTCATTGACCCAATTGGGAAAGGTGTGGTTAGACTATATGCAACCATTAAATTAGGCAACGCTACAGTAGGCAGAACTAGAATTACAAACAATGACCATTGTAATCTTCAGTGGTATGAATCTTTTCGAATTTATACTGCTCATGTTGCAACTGATGTCATGTTTTCTATCCAAGAAGAAGAACTAATTGGCACAAAATTGATTGGCACAGCTTATTTTCCTGTTGAAGATTTAGGAAATGGACAACAACTTGATAGATGGCTTCATATCTTGAATAAGAAACATAAACCTCTCCAAGGAGGTCCTAGAATTCATGTAAAGGTACAGTTTTCTGATGTCACTCAGGACATTAACTGGTCTCAAGGGATTATAAGTCCACAGTTTCCTGGAGTCCCACACTCGTACTTCACTCAGAGAAGTGGTTGCAGTGTCACACTTTACCAGGATGCTCACATTCAAGACAATTTTTTCCCCAAAATTCCCTTGACTGGGGGAACGTACTATGAGCCACACAGATGCTGGGAAGATGTCTTTGATGCCATTTACAATGCTGAGCACTTGATCTATATAGCAGGATGGTCTGTTTACACCAAAATTACCTTGATTAGGGATATGAGTAGAGAACAAGAAGGAGAGTTGACACTTGGAGAACTTCTTAAAATGAAGGCTGCTGATGGAGTTACAGTTCTAATGCTTGTTTGGGATGACAGAACTTCAACAAAACTGCTAAAAAATGATGGAGTGATGGCTACTCATGATGAAAATACAGAAAGTTACTTCCATAACACCGGAGTGCACTGCGTGTTATGCCCGCGCAATCCTGATAATGGACAAAGCATTGTCCAAGGCCTTGAGGTTGCCACCATGTTTGCACATCATCAGAAGATCTTAGTTGTCGATGGTGAGATGGCCAGTGTGGATGTAGAGGGAAGGAGAAGAATTTTGAGCTTCATTGGTGGAATTGATCTGTGTGATGGGAGATATGACACCCCTTTGCATTCCCTTTTCAGGACTCTAGGGACAACCCACCATGATGATTTTCATCAACCAAATTTTAGAGGTGCCTCAATTGCCAAAGGTGGACCAAGAGAGCCTTGGCATGACATACATTGCCGCTTAGAAGGACCAATAGCTTGGGATGTTTTGATTAATTTTGAGCAGAGGTGGAAAAAACAAGGTAAGGAGGATGTTTTACCTGTTGAACTTGGAAAACATGCTGATATTTTTGTACCCCCAACACCACTAGTAGATAATGAAGCATGGAATGTTCAACTGTTTAGATCCATTGATGCAGGAGCTGCTTATGGCCTCCCAAATACCCCAGAGGATGCAGCCAGGTATGGTCTTCTGATTGGGAAAGATCATGTCATTGACTGCAGCATCCAAAGTGCTTATATTAATGCTATCAGGAGAGCTAAAAATTTTATCTACATAGAAAACCAATATTTCCTTGGAAGCTCTTTTTGCTGGAATTCAGATGACCTAAATATCAATGAGGTGAAAGCTTTGCATTTGATTCCCAAGGAACTGTCTCTAAAAGTCGTTAGCAAGATTGAAGCTGGAGAGAGATTCAGTGTCTACATTGTTATTCCAATGTGGCCAGAGGGTATTCCTGAAAGTGCAGCTGTTCAGAGCATCCTGAATTGGCAAAAAATGACAATGAATATGATGTATACTGATATTGTTCATGCTCTACAAGTCAAAGGAATCCAAGCAGACCCAAAAGACTATTTGAGTTTCTTTTGCCTTGGAAATCGGGAAAAGAAGAATAACGGAGAGCTTGAACCTTCTACAGGGCCTGAACATGAATCGGATTACAACAGAGCTCAACAAGCAAGGCGGTTCATGATCTATGTCCATGCCAAAATGATGATAGTTGATGACGAATACATAATAATTGGATCAGCTAACATGAATGAGCGTTCGATGAATGGAGCAAGGGACACAGAGATTGCTATGGGGGGGTACCAACCGCATCACTTAGCCACAAAGAGGGGTCAGATTCATGGCTTTAGAATGTCCTTGTGGTATGAGCACTTGGGCATTCTAGAAGACTCCTTTCTTGCGCCAGAGAGTTTGGAATGTGTGAGACAAATAAACCTCATTTCTAAAAGGAACTGGGAACTCTACTGTAGTGAAGCTTTGGATGAAGACTTGCCTGGCCATTTGCTTAGTTATCCCATAACAGTTACTCAAAGTGGAGAGGTCACAACCAATCATGGGATAGACTACTTCCCAGACACCAAGGCGCCTATTCTTGGCTCTATATCTCATCTTCCACCCATCTTAACCACTTAA 2754 0.4107 MSHSSIYEGSAIDEEEMGDEEIDDEEFYEAMYACIMALNMIAPTLMAKPGSAMAAKIKKSSRFFPFFKDCIEAIDMTHILTMVREQDWVGGTHDSKLLNVAITRRNGLKVAQVCSWRMRKLRTGTLLHGVLRVTIFEVDKFYRNDCCNCFPKVIDPIGKGVVRLYATIKLGNATVGRTRITNNDHCNLQWYESFRIYTAHVATDVMFSIQEEELIGTKLIGTAYFPVEDLGNGQQLDRWLHILNKKHKPLQGGPRIHVKVQFSDVTQDINWSQGIISPQFPGVPHSYFTQRSGCSVTLYQDAHIQDNFFPKIPLTGGTYYEPHRCWEDVFDAIYNAEHLIYIAGWSVYTKITLIRDMSREQEGELTLGELLKMKAADGVTVLMLVWDDRTSTKLLKNDGVMATHDENTESYFHNTGVHCVLCPRNPDNGQSIVQGLEVATMFAHHQKILVVDGEMASVDVEGRRRILSFIGGIDLCDGRYDTPLHSLFRTLGTTHHDDFHQPNFRGASIAKGGPREPWHDIHCRLEGPIAWDVLINFEQRWKKQGKEDVLPVELGKHADIFVPPTPLVDNEAWNVQLFRSIDAGAAYGLPNTPEDAARYGLLIGKDHVIDCSIQSAYINAIRRAKNFIYIENQYFLGSSFCWNSDDLNINEVKALHLIPKELSLKVVSKIEAGERFSVYIVIPMWPEGIPESAAVQSILNWQKMTMNMMYTDIVHALQVKGIQADPKDYLSFFCLGNREKKNNGELEPSTGPEHESDYNRAQQARRFMIYVHAKMMIVDDEYIIIGSANMNERSMNGARDTEIAMGGYQPHHLATKRGQIHGFRMSLWYEHLGILEDSFLAPESLECVRQINLISKRNWELYCSEALDEDLPGHLLSYPITVTQSGEVTTNHGIDYFPDTKAPILGSISHLPPILTT* 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0578 917 SUPERFAMILY Phospholipase D/nuclease 266 551 - -
Apr9g0578 917 Pfam C2 domain 131 241 IPR000008 -
Apr9g0578 917 PIRSF PLD_plant 117 917 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Apr9g0578 917 Pfam Phospholipase D Active site motif 768 794 IPR001736 GO:0003824
Apr9g0578 917 Pfam Phospholipase D Active site motif 440 479 IPR001736 GO:0003824
Apr9g0578 917 ProSiteProfiles C2 domain profile. 107 240 IPR000008 -
Apr9g0578 917 SMART pld_4 440 479 IPR001736 GO:0003824
Apr9g0578 917 SMART pld_4 767 794 IPR001736 GO:0003824
Apr9g0578 917 PANTHER PHOSPHOLIPASE D 125 917 IPR015679 -
Apr9g0578 917 PANTHER PHOSPHOLIPASE D 125 917 - -
Apr9g0578 917 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 126 264 IPR035892 -
Apr9g0578 917 SMART C2_3c 130 239 IPR000008 -
Apr9g0578 917 Gene3D Endonuclease Chain A 314 557 - -
Apr9g0578 917 Gene3D C2 domain 127 274 IPR035892 -
Apr9g0578 917 Pfam Phospholipase D C terminal 836 907 IPR024632 -
Apr9g0578 917 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 440 479 IPR001736 GO:0003824
Apr9g0578 917 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 767 794 IPR001736 GO:0003824
Apr9g0578 917 Gene3D Endonuclease Chain A 601 815 - -
Apr9g0578 917 SUPERFAMILY Phospholipase D/nuclease 612 848 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0578 Apr-Chr9 8473992 8481785 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0578 126 917 Phospholipase D Gene Family (Wang group) AT3G15730 62.330 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0578 K01115 - qsu:111988169 1149.42