Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0575 ATGGTGCAATCAAGGAAGTTCAGAGGTGTCAGGCAGCGTCATTGGGGTTCATGGGTATCCGAAATTCGCCACCCACTTCTGAAGAGGAGGGTGTGGCTAGGCACGTTTGATACAGCGGAAGAAGCGGCACGAGCATATGACCAAGCAGCTATATTGATGAGTGGGCGAAATGCGAAAACAAATTTCCCAATACTCGAAACACCAAAAACCGCAGAAGAAACCCCATCTATCTCAAAGGAAATGGAAGAGATTCTTCACGCGAAGCTTCGAAAATGCGGGAAACTTCCCTCCCCTTCTATGACATGCCTGAGGCTCGACACCGAGAATTCCCACATTGGAGTGTGGCAAAAACGTGCGGGCCAGCGTTCTGATTCGAATTGGGTGATGATGGTTCAGTTGGGGAAAAAGAGAGCCAATGAAGATGGTGATAGTTCTCTACCTTCTTCTTCTTCGTTTTCTGAACGTGAACAGTCTCAACAAGTGGCAAGGCAAGAACTTGTGAGAAGGCAGATGGATGAGGAGGAGAGAATTGCGCTGCAAATGATAGAAGAATTGCTCAACAGAAATTGTCCTGTTACCCTTTCATTTAATAGCGCTTACTGA 603 0.4693 MVQSRKFRGVRQRHWGSWVSEIRHPLLKRRVWLGTFDTAEEAARAYDQAAILMSGRNAKTNFPILETPKTAEETPSISKEMEEILHAKLRKCGKLPSPSMTCLRLDTENSHIGVWQKRAGQRSDSNWVMMVQLGKKRANEDGDSSLPSSSSFSEREQSQQVARQELVRRQMDEEERIALQMIEELLNRNCPVTLSFNSAY* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0575 200 MobiDBLite consensus disorder prediction 143 163 - -
Apr9g0575 200 MobiDBLite consensus disorder prediction 136 163 - -
Apr9g0575 200 Pfam AP2 domain 6 54 IPR001471 GO:0003700|GO:0006355
Apr9g0575 200 Gene3D AP2/ERF domain 5 65 IPR036955 GO:0003700|GO:0006355
Apr9g0575 200 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Apr9g0575 200 PRINTS Ethylene responsive element binding protein signature 7 18 IPR001471 GO:0003700|GO:0006355
Apr9g0575 200 PRINTS Ethylene responsive element binding protein signature 29 45 IPR001471 GO:0003700|GO:0006355
Apr9g0575 200 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 196 - -
Apr9g0575 200 SUPERFAMILY DNA-binding domain 6 64 IPR016177 GO:0003677
Apr9g0575 200 ProSiteProfiles AP2/ERF domain profile. 6 63 IPR001471 GO:0003700|GO:0006355
Apr9g0575 200 PANTHER AP2-EREBP TRANSCRIPTION FACTOR 1 196 - -
Apr9g0575 200 SMART rav1_2 6 69 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0575 Apr-Chr9 8376752 8377852 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0575 1 189 AP2-EREBP Transcription Factor Family AT1G15360 58.416 7.45e-75 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Apr9g0575 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0575 - - gmx:100779921 302.753