Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0567 ATGTCAGCCAAATGTAGCAAAATCCGTCACATTGTTCGCCTGCGCCAGATGCTACGGCGGTGGCGCAACAAGGCCCGCATGTCTGCCAATCGTGCACCGTCCGATGTGCCTGCCGGACACGTGGCGGTGTGCGTGGGCAGCAACTACACAAGATTTGTTGTGCGCGCGTCGTACCTGAACCACCCCCTTTTCAAGAAGCTTCTCCTTGAAGCCGAGGAAGAGTACGGCTTCGCCAACCACGGACCCTTGGCCATCCCTTGCGACGAATCGCTCTTCCAAGAGGCTCTCCGGTTCATTTCCCGGTCCGATTCCGACAAATCGAACCGGTTTTTAAACCTCGACGATTTTCAGAGACACTGCCACGTCAGCATCAGAAACAACCTTGACTTCTGGCCCGAATCTCGACCGATCCTCCACGCCCTCACTGACAAAACCATTTGGTAA 444 0.5541 MSAKCSKIRHIVRLRQMLRRWRNKARMSANRAPSDVPAGHVAVCVGSNYTRFVVRASYLNHPLFKKLLLEAEEEYGFANHGPLAIPCDESLFQEALRFISRSDSDKSNRFLNLDDFQRHCHVSIRNNLDFWPESRPILHALTDKTIW* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0567 147 Pfam Auxin responsive protein 13 98 IPR003676 GO:0009733
Apr9g0567 147 PANTHER SMALL AUXIN-UP RNA-RELATED 4 140 - -
Apr9g0567 147 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 140 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0567 Apr-Chr9 8039683 8040126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0567 3 146 Calmodulin-binding Proteins AT4G34750 51.316 9.79e-47 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0567 K14488 - gmx:100789753 255.758
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0567 9 8039683 8040126 Apr9g0567 9 8039683 8040126 ECH
Apr9g0567 9 8039683 8040126 Apr5g1646 5 20086335 20086763 PCT