Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0563 ATGGGGAAATCGAGTTCCTGCTTCAGATTAATCACATGTGGCGGTGATCCGTCGGAGAAAGATGATCATCACCAAGTAGTATCGGAGATCAATTCTAATGATAAACGTGGTTGGAGTTTCCGGAAGAGATCTGCAAGGCATCGTGTGCTTAGCAATACTGTGATAACAGAGACCCCATCTACTGCAAATAAGGGGAGTTCTGAATGTACAAGTATTAATTTTCAATCAATGACTGAACCTGCTGTTGTTGAGAAGGTTTGTACAACAAATTTCTCTGATGAGAAGCCCCAGTTATCTAACTTGGCAAGCTCAGAAATGTCAGAAACAATTATCACTGAAACTGAGGCAAAAGTGGATGTCCATCTACCTGAGTCTGTTGTTGTCATTGTCCAGGCTGCCATTAGGGGGTTCTTGGCTCAAAGAGCATTGCTAAAGAGTAAGAATGCAGTGAAGTTGCAAGCTGCTGTTCGAGGGCACTTGGTCAGGAAGCATGCTGTGGGAACACTGCGTTGTGTGCAAGCTATTGTTAAAATGCAGCTCCTTGTGCGAGCTCGACATGCTAAGCAGGCACGTTCAGAAAATCATTTAAATCACAAGGAAGGAAAAAATGGTAATGAACATCATGTGAGTGATGTAACCAAATCAAATGTGACGCACACTTCTGTAGAGAAGCTGCTCAACAATAGGTTTGCTTATCAGCTATTGGAATCCACACCTAAGAACAAACCTATTGGTATCAAATGCGACCCTTCTAAAGCTGATTCTGCTTGGAATTGGTTGGAGAGATGGATGTCTGTTTCTTCAAAAGATTCTGCCGAGTACAAGAGAACAACTTGTATGTCAGAACAACCAGACAAAACCAAAGATAGCACTTCTGTGACTCAATTGGAAACAGGTGTTCCATCTGAAGTTCTACTTCAGGTAGAAGACTCTAAGCCCACTGTTACTGATTCACCTCTGCCATCTGAGGATGAAGAGAAGACAACAGCTCATGATACTAACAACTTCAACTTCGAAACTAGCCCATCTACATCTTCTCTTGTGCGAGAGAACTTGGAACAGGCTCCTACTGAAAAGACAATTACTGAGGATGCTAAAGTTACCTCAACTGAAGTTGATTCTTACCAAATTGAAAACATGGAATTAGAGGAGGAAAAGAAGCTGACCACGTATGATGTTAACGACTTCAATTTTCAAGCAAGTCCCTCAACTTCCTCTCCTGTAAAAGATAACTTGGAACAGGCTCCTACTGAATCGGTGATTGCAGATGATGCTAAAGTAAACACAACTGAAATTGATTCTTTCCAAAATGAAAAAATGGAATCACATGCCAGTGTACTACAAGAACCTAGTTCTCTTTCTCAGAAGCCTGAAGTTGATGGCGAACAGCACAGACAATCTATGAAAACATTTGCTTCAGACCAACTGGAGACTGAGGGAAAGAAATCTGTACATGGGTCAAGGAAGTTCAGTAATCCTGCTTTTGTTGCTGCACATTCAAAATTTGAAGAGCTGAGTTTAACGGCAAATTCAGGTAGGTCAAGCAGTTTGTTCAATCAAGACGCATCTGTTGAATCTCAAGCAGATACCTCTTCGGTTATCACAGATACTGCATATAAATCAAAAGAGTTATTTTCTGAGAATTCTGCTCCCTATCCTTCCAGAATTGGTGGCTCTGAATGTGGTACTGAACTCTCCATTTCTTCAACTCTGGATTCACCTGACATATCAGACGTTGGGACTATGGAAAATGAGCATGATGCAAAAAATTTAGCAGAAGCCATAAATAATCCTGAAAATAAGATTGATCATGGTGTTGAGGGAAAAGCTCTGTGTGCCACTCCAACTTCTAATTTACCTAACTCTGATTTGAATCCATTAGAAATTGTTGATGAGGTCGATGACAATGAGGTTCACTCAGTGATGCTTGGGGATTCTAAAGAGCCTGCTGCTGAGCCCAAGAAGAATGCATCTGAACTGTTGGGAGAGAAGACAGACACCGGTCTGCATGATTCCAAGTTGTCTCCAGAAGCTTCACCAAGAAGCCATATGACCATCCCTGAATCCCAAGGAACACCTTCAAGTCAGGTATCTGTGAAAACTAAAGAGAGCAAAGTCAACAAGAGTGGATCCAGCAATAGACGGAGAACACTGTCTGCTGCTAACAAGTCTCCTGCAAATGCAAATTATGATTCAGGCTCAAGAGGTAGTAGAGAACAATTGCCAAAAGATCAACTGAATGGCAAGAGACGAAAATCCTTTGGCTTGGTAAAACCTGATCATGCTGATCAAGAGCTTGGAGATAATAGTAGTAACAATAGTTCTCTTCCCCATTTCATGCAAGCTACTGAATCTGCTAGGGCCAAGATAAATGCAAATAACTCTCCAAGATCAAGTCCAGATGTACATGACCAAGACATTCCTGTTAAGAAGAGACATTCCTTACCTGGTGCAACTGGAAGGCAGGATTCTCCACGCATCCAACGATCAACATCTCATGCCCAGCAGGGCGCAAAGGGAAATGAGAGAAAATGGCTGAGGTGA 2544 0.4194 MGKSSSCFRLITCGGDPSEKDDHHQVVSEINSNDKRGWSFRKRSARHRVLSNTVITETPSTANKGSSECTSINFQSMTEPAVVEKVCTTNFSDEKPQLSNLASSEMSETIITETEAKVDVHLPESVVVIVQAAIRGFLAQRALLKSKNAVKLQAAVRGHLVRKHAVGTLRCVQAIVKMQLLVRARHAKQARSENHLNHKEGKNGNEHHVSDVTKSNVTHTSVEKLLNNRFAYQLLESTPKNKPIGIKCDPSKADSAWNWLERWMSVSSKDSAEYKRTTCMSEQPDKTKDSTSVTQLETGVPSEVLLQVEDSKPTVTDSPLPSEDEEKTTAHDTNNFNFETSPSTSSLVRENLEQAPTEKTITEDAKVTSTEVDSYQIENMELEEEKKLTTYDVNDFNFQASPSTSSPVKDNLEQAPTESVIADDAKVNTTEIDSFQNEKMESHASVLQEPSSLSQKPEVDGEQHRQSMKTFASDQLETEGKKSVHGSRKFSNPAFVAAHSKFEELSLTANSGRSSSLFNQDASVESQADTSSVITDTAYKSKELFSENSAPYPSRIGGSECGTELSISSTLDSPDISDVGTMENEHDAKNLAEAINNPENKIDHGVEGKALCATPTSNLPNSDLNPLEIVDEVDDNEVHSVMLGDSKEPAAEPKKNASELLGEKTDTGLHDSKLSPEASPRSHMTIPESQGTPSSQVSVKTKESKVNKSGSSNRRRTLSAANKSPANANYDSGSRGSREQLPKDQLNGKRRKSFGLVKPDHADQELGDNSSNNSSLPHFMQATESARAKINANNSPRSSPDVHDQDIPVKKRHSLPGATGRQDSPRIQRSTSHAQQGAKGNERKWLR* 848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0563 847 Gene3D - 124 164 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 595 847 - -
Apr9g0563 847 PANTHER IQ-DOMAIN 5-RELATED 375 842 - -
Apr9g0563 847 PANTHER IQ-DOMAIN 5-RELATED 1 354 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 766 801 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 821 838 - -
Apr9g0563 847 SMART iq_5 145 166 IPR000048 GO:0005515
Apr9g0563 847 SMART iq_5 122 144 IPR000048 GO:0005515
Apr9g0563 847 MobiDBLite consensus disorder prediction 545 581 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 276 347 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 333 347 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 678 741 - -
Apr9g0563 847 ProSiteProfiles IQ motif profile. 145 174 IPR000048 GO:0005515
Apr9g0563 847 MobiDBLite consensus disorder prediction 632 671 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 742 765 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 284 301 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 438 457 - -
Apr9g0563 847 PANTHER PROTEIN IQ-DOMAIN 32 1 354 - -
Apr9g0563 847 PANTHER PROTEIN IQ-DOMAIN 32 375 842 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 187 213 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 398 413 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 561 577 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 512 533 - -
Apr9g0563 847 Coils Coil 365 385 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 438 487 - -
Apr9g0563 847 Pfam IQ calmodulin-binding motif 127 142 IPR000048 GO:0005515
Apr9g0563 847 Pfam IQ calmodulin-binding motif 147 164 IPR000048 GO:0005515
Apr9g0563 847 Pfam Protein of unknown function (DUF4005) 765 833 IPR025064 -
Apr9g0563 847 ProSiteProfiles IQ motif profile. 124 151 IPR000048 GO:0005515
Apr9g0563 847 MobiDBLite consensus disorder prediction 187 217 - -
Apr9g0563 847 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0563 Apr-Chr9 7975055 7981790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0563 350 847 IQD Protein Family AT1G19870 33.205 2.11e-48 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0563 - - aprc:113847201 1669.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0563 9 7975055 7981790 Apr9g0563 9 7975055 7981790 ECH