Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0549 ATGGGAATTGAGGAGAGAAAACAAATGAAGAAGCCAGCACAAGCCAGCTCTAGAAAGGGGTGTATGAGGGGCAAAGGAGGCCCTGAGAATGCAAGTTGCACCTACAAAGGCGTGAGGCAGAGAACTTGGGGCAAATGGGTTGCTGAGATCCGTGAACCCAACCGTGGTGCTCGCCTTTGGCTTGGCACATTTGAGACCTCTCACGAAGCCGCTTTGGCTTACGATACTGCTGCACGTAAGCTTTATGGTTCAGATGCAAAGCTCAATCTGCCAGAGCTTTCTCCTCCTCCTGTGAATTCTCAATCGCCAAATCCTTCCCCTAACACCCAAATTCCCCAAATGCAACAGCCTCAGATTCACCCCAACAACTTTGATACCCCAAGTGTCACTTCTGATCTGAATAAAAGCATGAACCCTTTAGTCTCTGTGACTTCTGAAATTGTTGGTGATGGACCATTCTATACCAACAACCCTATTGTGACTCCTCCTCTTGAAACCAACACTAATCCAATTGAAAATCATTCCAAGCCCATAGGTCACAACGAAGAAGATAAACTTCGTTCCTTTTGGGGGACCATGAATGAGGGTATGCCTTTGTTTGATGAATCCATTTGGACTGAAGCTGCTATGTCCATCGATTTTCCTATTATTTCAGATGATCAAATTTATGCAGCTGCAAATTTCCCTGATGTTGGTGCCTGGGACTCCTTGCAAACTCATTGGTGCATGTAA 732 0.4577 MGIEERKQMKKPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDTAARKLYGSDAKLNLPELSPPPVNSQSPNPSPNTQIPQMQQPQIHPNNFDTPSVTSDLNKSMNPLVSVTSEIVGDGPFYTNNPIVTPPLETNTNPIENHSKPIGHNEEDKLRSFWGTMNEGMPLFDESIWTEAAMSIDFPIISDDQIYAAANFPDVGAWDSLQTHWCM* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0549 243 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 240 - -
Apr9g0549 243 CDD AP2 33 93 IPR001471 GO:0003700|GO:0006355
Apr9g0549 243 MobiDBLite consensus disorder prediction 88 135 - -
Apr9g0549 243 Gene3D AP2/ERF domain 34 92 IPR036955 GO:0003700|GO:0006355
Apr9g0549 243 MobiDBLite consensus disorder prediction 104 135 - -
Apr9g0549 243 SUPERFAMILY DNA-binding domain 34 91 IPR016177 GO:0003677
Apr9g0549 243 PRINTS Ethylene responsive element binding protein signature 35 46 IPR001471 GO:0003700|GO:0006355
Apr9g0549 243 PRINTS Ethylene responsive element binding protein signature 57 73 IPR001471 GO:0003700|GO:0006355
Apr9g0549 243 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D-LIKE 2 240 - -
Apr9g0549 243 MobiDBLite consensus disorder prediction 1 33 - -
Apr9g0549 243 Pfam AP2 domain 34 83 IPR001471 GO:0003700|GO:0006355
Apr9g0549 243 SMART rav1_2 34 97 IPR001471 GO:0003700|GO:0006355
Apr9g0549 243 ProSiteProfiles AP2/ERF domain profile. 34 91 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0549 Apr-Chr9 7678137 7678868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0549 8 109 AP2-EREBP Transcription Factor Family AT1G75490 74.766 1.19e-49 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr9g0549 AP2 3.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0549 - - gmx:100790057 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0549 9 7678137 7678868 Apr9g0549 9 7678137 7678868 ECH
Apr9g0549 9 7678137 7678868 Apr5g1621 5 19852949 19853662 PCT