Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0534 ATGTCAAAATCTGTGCAAGTCCCAGATTGTTTCTACCCTGGGCCACCAATTACCATACCCCCAAGTGCTCCAACGCCAAAGCATTCTCTCTATCTATCTAATCTTGACGACCAAAAGTTCCTTAGATTCGCCATTAAGTATTTGTATATCTTCAAAGAATCTGTGAGCTTGGATGTGTTGAAGTGTTCTCTGTCTAGAATTTTGGTGGATTACTACCCTTTGGCTGGGAGGTTAAGGACCAGCATTTATGGGGATGATCACAAGCTTGAGGTGGATTGCAATGGAGAAGGTGCTGTTTTTGCTGAGGCTTTCATTGGTTCCACCGCTGAAGAATTGCTTGAATCTTCCAAGGTACCAAACAAGTCATGGAGAAAGTTCTTGTACAAGGTCGAAGCTCAAAGTTTCTTAGATGTTCCTCCTCTTGTGATCCAGGTGACGAATCTCCGTTGCGGAGGGATGATCCTGTGCACGGCGATCAACCACTGTCTATGCGACGGCATCGGCACGTCACAGTTTTTACACGCATGGGCCCAACTGACCAAAGACCCCAAAGCGGATTTGACAATCGTGCCCTTCCACGAGCGACACGTGTTGAAACCTCGAGAACCCCCGGAGGTAAACTTCCCCCACCCAGAATACACCAGAACAAAACCCACTTGTCAAGTGGACCTGCTCAAGTTGATGCAGTCGCAGCCACTGGTGGTCACGTCCTTCACTTTCGACCACTCCGAAGTGCTTCGCTTGAAGAAGCAGTGCGTGCCGTCGCTGAAATGCAACACCACCTTCGAAACAATTGCGGCGCATACGTGGCGCTCGTGGGTTAAATCCCTGAACCTGTGTCCCACACTAACGGTAAAGCTCCTTTTTTCCGTTAACGTTAGGAAAAAGGTGAACCTCCCTGAAGGGTATTATGGGAATGGGTTCGTCTTAGCGTGTGCTGAGAGCACGGTTAAGGATTTGGTTGCTGATAAAAACCTGCGACACGGTTTGAAACTGGTGCAACAAGCTAAGTGTGCTTTGGAGGATGATGGGTATATAAGGTCGATGGTTGATTTGTTGGAGGACAAAACAGTAAAAATGGATGTTTCTAGAAGCTTGGTTATATCACAGTGGTCTAGGCTAGGGTTAGAGGATGTGGACTTTGGAGGAGGGAAACCCTTGCATATGGGTCCTTTAACAAGTGATGTTTATTGCTTGTTTTTACCCGTTGTTGGAAATGCTAATGCGGTGAGAGTGCTTGTGTCGGTACCGGAGAGTGTTGTGGAAAGTTTTCGGTATCACATGATGGAGAAAGAGAGTTGGGAAAAAGATGAAAATAGTGATCGTAACACAAACGGGTATCGTGTACAACAACATGGATTGTTCTGA 1368 0.4671 MSKSVQVPDCFYPGPPITIPPSAPTPKHSLYLSNLDDQKFLRFAIKYLYIFKESVSLDVLKCSLSRILVDYYPLAGRLRTSIYGDDHKLEVDCNGEGAVFAEAFIGSTAEELLESSKVPNKSWRKFLYKVEAQSFLDVPPLVIQVTNLRCGGMILCTAINHCLCDGIGTSQFLHAWAQLTKDPKADLTIVPFHERHVLKPREPPEVNFPHPEYTRTKPTCQVDLLKLMQSQPLVVTSFTFDHSEVLRLKKQCVPSLKCNTTFETIAAHTWRSWVKSLNLCPTLTVKLLFSVNVRKKVNLPEGYYGNGFVLACAESTVKDLVADKNLRHGLKLVQQAKCALEDDGYIRSMVDLLEDKTVKMDVSRSLVISQWSRLGLEDVDFGGGKPLHMGPLTSDVYCLFLPVVGNANAVRVLVSVPESVVESFRYHMMEKESWEKDENSDRNTNGYRVQQHGLF* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0534 455 Gene3D - 16 215 IPR023213 -
Apr9g0534 455 Pfam Transferase family 18 428 - -
Apr9g0534 455 Gene3D - 221 430 IPR023213 -
Apr9g0534 455 PANTHER BNAC03G58010D PROTEIN 14 430 - -
Apr9g0534 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 14 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0534 Apr-Chr9 7509613 7512187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0534 21 430 Monolignol Biosynthesis Gene Families AT5G48930 28.704 3.96e-47 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0534 - - aip:107645267 682.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0534 9 7509613 7512187 Apr9g0534 9 7509613 7512187 ECH