Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0517 ATGGTTTGGAGAAATCTATTAGCTTCCACTTCACGACAGAACATCAACAAACTCAATGCAATCTTAGGATCCCCTTTGTTCACTACCACACGCGCCGTGTTTCCCTCTTCTTCCCACACACGCGCTTCTTCCTCTGTTTTCCAATTACTTCCAAATTCTTCATTCTCCACCAACCTTCATTCCCGTCAACAGAGCAACAGCAATAACCACCCAAAACTCCTCGCCCCGCGAAACGACGCTGTCGTCGACGACGATGAAACGACGAACGAGTTCTTGTCGCGGTTCGTTTGGATAATGCGGAAGAAGGTGAAGGAAGCGTACCCTGATTCCGATAAGAGCACCGTCGACGGCATGCTTCTGGTGATCGTGGACAGGGTCGTGTCGGAAATGGAAAAGGGTAGCGTGGAAACGGCGTCGTTTGGTGGTGGAGATTTCAGTGAGGATTTGTGGAAAACGGTGTGGGAAGTGAGTAACAAGGTGTTAGATGACATGAACAAGGAAAGGAAGAAGGAGAGAATGAAGGGTTTCTTGCAGTGTGAGGAGGTGAAGGATATGTGTAGGTTCGCCGGCGAAGTAGGAATTCGCGGCGATTTGCTGAGAGAACTTAGGTTCAAATGGGCGCGTGAGAAGATGGAGGAACATGATTTCTATGAGGGTTTGGAGAGGATGAGAAAAGAGGCACAAATTGAAGACAATGAAAGTGGGAACAGTGAGGTTGATGTTAGTGAGGAGAAGGGTAAGGTTGTTGAACTTCCCAAGAGGAGAGGGAAGATAAGGTACAAGATTTATGGGCTTGATTTGTCTGATCCTAAGTGGGAACAAGTGGCTGATAGGATCCATGATGCAGAACAAGTGTTGTGGCCACAGGAACCAAAGTTGATAACTGGGAAAGCTAAGCTTATTACTGAGAAGATTGAGTCATTGAAGGTTGATAATGATGATAGCTTGCCAACCCTGTTGGCTGAGTGGGTGGAGCTTGTAATGCCTACCAGGGTGGAATGGATGGATTTACTTGACAGATTGAAAAGGAAGAATCATCCTTTGTACTTGAAGGTGGCAGAAATGATATTGACCGAAGATTCTTTCCAAGCAAATGTATATGACTACTCTAGGCTTATTGATTTCTATGCTAAAGAGAGCTGCTTGGATGATGCTGAGAGGATCCTTAAGAAGATGAAAGAAAAAGGTATACAACCAGATGCTTCAACAGCCAGTACGTTGGTCCACATGTACTGCAAGGGAGGCAATCTCGAATGTGCAAAAGAAGCTTTTGAAGTCTTGACAACCCAGGGCTTCCAACCAGACATAAAAGTCTACACTTCAATGATCATGGCTTATGTAAATGATGGCCAGCCAAATTTGGGTGAGACATTGATGAGGGGGATGGAGATGAGAGATGTTAAGCCAACAAAGGAAATATATATGGCACTGCTCCATTCTTATTCTCAAAATGGTGATGTTCAAGGAGCTTCCCGAATATCAACAGCTATGCAGTTGTCAGGAATCCAGCAGAGTGTGGAGATTTGCACCCTGCTTATTGAGGCAAATGCACATGCTGGTGAACCTGATGAGGCAAGAAACAATTTTGACTACTTGATAAAAATTGGGCATAAGCCTGATGATAGGTGCACTGCTAGCATGATTTTGGCTTATGAGAAGGCTAACTTGTTGGACAAGGCACTAGATCTTCTTATGGAGTTAGAAAAGGATGGATTTGAGCCTGGGGTTGCGACTTATTCTGTTTTTGTGGACTGGCTGGGTAAGTTGCAGCTTGTTGATGAGGTTGAGCAACTTTTAGGTAAAATTGCTCTGCTGGGTGAGGCTCCTCCTATTAAAGTTCAAGTGAGTCTCTGTGATATGTATGCAAGGGCTGGAAATGAGAAAAAGGCTCTTCAAATTCTATCGGTTCTGGAAGCTAAGAAGAATGAATTAGGACCAGCAGAGTTTGAGAGAATTATATTCGGCCTTATTAATGGTGGGTTTCAGCGGGATGCACAAAGAATATATGGGATCATGGAAGCCCGGGGTTTTACTGCATCAAATTCACTTAAGTTAGCCCTTACAAAACCTGTCCGCAAAACACCAAGAATGAGATAG 2097 0.4444 MVWRNLLASTSRQNINKLNAILGSPLFTTTRAVFPSSSHTRASSSVFQLLPNSSFSTNLHSRQQSNSNNHPKLLAPRNDAVVDDDETTNEFLSRFVWIMRKKVKEAYPDSDKSTVDGMLLVIVDRVVSEMEKGSVETASFGGGDFSEDLWKTVWEVSNKVLDDMNKERKKERMKGFLQCEEVKDMCRFAGEVGIRGDLLRELRFKWAREKMEEHDFYEGLERMRKEAQIEDNESGNSEVDVSEEKGKVVELPKRRGKIRYKIYGLDLSDPKWEQVADRIHDAEQVLWPQEPKLITGKAKLITEKIESLKVDNDDSLPTLLAEWVELVMPTRVEWMDLLDRLKRKNHPLYLKVAEMILTEDSFQANVYDYSRLIDFYAKESCLDDAERILKKMKEKGIQPDASTASTLVHMYCKGGNLECAKEAFEVLTTQGFQPDIKVYTSMIMAYVNDGQPNLGETLMRGMEMRDVKPTKEIYMALLHSYSQNGDVQGASRISTAMQLSGIQQSVEICTLLIEANAHAGEPDEARNNFDYLIKIGHKPDDRCTASMILAYEKANLLDKALDLLMELEKDGFEPGVATYSVFVDWLGKLQLVDEVEQLLGKIALLGEAPPIKVQVSLCDMYARAGNEKKALQILSVLEAKKNELGPAEFERIIFGLINGGFQRDAQRIYGIMEARGFTASNSLKLALTKPVRKTPRMR* 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0517 698 PANTHER OS07G0661900 PROTEIN 1 688 IPR044657 -
Apr9g0517 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 365 399 IPR002885 -
Apr9g0517 698 MobiDBLite consensus disorder prediction 58 73 - -
Apr9g0517 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 435 469 IPR002885 -
Apr9g0517 698 Pfam PPR repeat family 365 413 IPR002885 -
Apr9g0517 698 Gene3D Tetratricopeptide repeat domain 478 689 IPR011990 GO:0005515
Apr9g0517 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 400 434 IPR002885 -
Apr9g0517 698 TIGRFAM PPR: pentatricopeptide repeat domain 438 470 IPR002885 -
Apr9g0517 698 TIGRFAM PPR: pentatricopeptide repeat domain 403 436 IPR002885 -
Apr9g0517 698 TIGRFAM PPR: pentatricopeptide repeat domain 369 401 IPR002885 -
Apr9g0517 698 Pfam PPR repeat 546 572 IPR002885 -
Apr9g0517 698 Pfam Pentacotripeptide-repeat region of PRORP 422 524 IPR033443 -
Apr9g0517 698 Gene3D Tetratricopeptide repeat domain 305 436 IPR011990 GO:0005515
Apr9g0517 698 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 540 574 IPR002885 -
Apr9g0517 698 MobiDBLite consensus disorder prediction 58 77 - -
Apr9g0517 698 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 5, MITOCHONDRIAL 1 688 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0517 Apr-Chr9 7271183 7274536 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0517 356 693 Glycosyltransferase AT1G05670 22.933 5.08e-24 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0517 - - gmx:100794017 932.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0517 9 7271183 7274536 Apr9g0517 9 7271183 7274536 ECH