Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0474 ATGGGAAAGGAACAATCCCAGTCTCCTTGCCTAACAGATGTGGAGCCAGACAGAATTAGTTGTTTACCAGATCATGTAGTAGATCATATTCTGTCGTATGTGTCGATTAGGGAAGCGGTGAGAACAAGTGTTTTATCAAGCAAATGGAGGTACAAATGGGCCACGCAACCGAATCTTGTGTTTGACAACCAATGTGTCCCTGTAGCTTCTCAGGACCTTACAATTATCAAGAACAAGCTTTTGAGAGCTATTGATCATGTACTTTTACTTCATTTTGGGGAAATCAACAAGTTCAAGCTCTCACATCGTGATCTCATTGGTGTGACTGATATTGATCGTTGGACTAGCCATCTATGCAGAAGGTCTATTAAAGAGTTTGTGCTGGAAATCTGGAAAGGGCAACGCTATAAGATACCCTCGTACTTATTTTCTTGTCAAAGTTTGACTCATTTAGAATTATTCAATTGTTGGCTTAAACCTCCATCTAATTTTCGAGGCTTTAGGAACTTGAAGAGTCTTGATCTGCAACATGTTACCTTGGCTCAAGATGTTTTTGAAAATTTGATATCCAACTGCCCTCAGCTTGAACGGTTGACTTTGATGAACTTTGATGGTTTCACTCAACTTAATATTGATGCACCGAATCTCCTGTTTTTTGACATTGGAGGTAGATTTGAGGATGTTAGCTTTAAGAACACTTCCCAATTAGCTGTGGTATCTATTGGTTTGTATTTGAACTTTGAAATCAACCATAGTAGATTGCATGTTGGTTCAAGCAATTTGCTCAAATTTTTTTATCATCTGCCACACGTGCAAAGGCTAGAGGTTCAAAGCTATTTTTTAAAGTATTTAGCAGTGGGAGTTGTGCCAATAAATCTTCCGCGTGAATGCGCTGATCTAAGTTATCTTTCCATAAGAATAAACTTCAATGATTCGAAGGAAATTTCAGCTGCTCTTTGCCTTTTACGAAACTCACCTAATCTACAAGAACTAGAAATATTGGGTCGACCTGAGGAGCAAACTGTTCTGTCAACAGACAACTATTGTTGGGAAGATGTCTATTTGACTTGTTCAGTCATGCAACTGCGATATGTGAGGATAGATGGTATCTCTGGTATCCAACCCGAGTTAGATTTTATCAGCTTCCTACTTATTTACTCTCCTGAGCTAGAAAGGATGACTGTGAAGCCTGGTTCAAGTGTTGGATCAGAGTTGATGAAAGAACTGTTGCGGTTTAGGAGATCCTCGGGACGAGCTGAAATTATTTACGTGGAACCTTCTTAA 1284 0.3925 MGKEQSQSPCLTDVEPDRISCLPDHVVDHILSYVSIREAVRTSVLSSKWRYKWATQPNLVFDNQCVPVASQDLTIIKNKLLRAIDHVLLLHFGEINKFKLSHRDLIGVTDIDRWTSHLCRRSIKEFVLEIWKGQRYKIPSYLFSCQSLTHLELFNCWLKPPSNFRGFRNLKSLDLQHVTLAQDVFENLISNCPQLERLTLMNFDGFTQLNIDAPNLLFFDIGGRFEDVSFKNTSQLAVVSIGLYLNFEINHSRLHVGSSNLLKFFYHLPHVQRLEVQSYFLKYLAVGVVPINLPRECADLSYLSIRINFNDSKEISAALCLLRNSPNLQELEILGRPEEQTVLSTDNYCWEDVYLTCSVMQLRYVRIDGISGIQPELDFISFLLIYSPELERMTVKPGSSVGSELMKELLRFRRSSGRAEIIYVEPS* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0474 427 SUPERFAMILY RNI-like 112 336 - -
Apr9g0474 427 Pfam Leucine Rich Repeat 169 193 IPR013101 -
Apr9g0474 427 PANTHER F-BOX/RNI/FBD-LIKE DOMAIN PROTEIN 13 393 - -
Apr9g0474 427 SUPERFAMILY F-box domain 16 59 IPR036047 GO:0005515
Apr9g0474 427 PANTHER F-BOX PROTEIN-LIKE 13 393 - -
Apr9g0474 427 Gene3D Ribonuclease Inhibitor 130 378 IPR032675 -
Apr9g0474 427 Pfam F-box domain 19 51 IPR001810 GO:0005515
Apr9g0474 427 Gene3D - 6 129 - -
Apr9g0474 427 ProSiteProfiles F-box domain profile. 16 64 IPR001810 GO:0005515
Apr9g0474 427 SMART fbox_2 22 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0474 Apr-Chr9 6642264 6644702 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0474 5 203 EF-hand Containing Proteins AT5G41840 26.168 1.44e-12 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0474 - - gmx:100782183 736.102
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0474 9 6642264 6644702 Apr9g0474 9 6642264 6644702 ECH