Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0463 ATGTTTACTAATTCGCACCACAAAGTAATGGGAAACTTATCACCTTTGTCGGAGCCAGACCTCTCCTTAAACATTAGCCCACCTTCTATTTCGGATTCTGAAGCCAAAGAAGTGGGAGGCTTTAGCAAAGTGCTTTACAATGATATGTGTTCAACCTCTGATTCAGGAAGTAGTGGAAGTGATTTAAGCCATGAAAATGGGTTGTTCCACACGGACACTGTCCATAACCTTGTTCATCGTGAGCCCACATTGAGATTAGGCGTTGGAAACATGCCAGATTTGAATCCACATCATCATCATCATCACCAAGTACAAGGAGTCCCGAGAAACTTCAATCACCACCACCACCACCTCCAACCTCACATCTATGGCCGCGATTTCAAACGAAGTGCAAGGGTTGTTAATGGTGTCAAAAGAAGCGTCAGGGCTCCTAGGATGAGATGGACCACGACCCTCCATGCCCATTTTGTTCATGCGGTTCAGCTTCTTGGAGGCCATGAAAGAGCAACTCCGAAGTCTGTGTTGGAGTTAATGAATGTTAAAGATCTAACCCTAGCACACGTCAAGAGTCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGGTCATGGGCAGACAGATATAGGCTTGAGCCGAAGGCCAGGGATTGTTCATGTGCATGCAGCCACAGCTACTTGTGAGAGACCCAATTTACTTGACCCGCTTCAAAAATCGCACAGGACATGGCAATCATCAATAGGGACAAATACAAACAATTGTAGACAAGAACCGGAAATCGGATTGACCTATTCTCAGCTAAAGGGAAATGAAACGATGGTGGATGAGCATAATTATGGAGGCCTGTCAAATTGCATGAAGGAGAGTTTGGATTCTACCCCTTTGTCACGTTCCGAGGCGATTCTTGACCTTGAATTCACCCTTGGAAGATCCAGTTGGCAAACAGAACACGCCGAATCATCAAGAGAGTTAACTCTTCTCAAGTGTTAA 999 0.4515 MFTNSHHKVMGNLSPLSEPDLSLNISPPSISDSEAKEVGGFSKVLYNDMCSTSDSGSSGSDLSHENGLFHTDTVHNLVHREPTLRLGVGNMPDLNPHHHHHHQVQGVPRNFNHHHHHLQPHIYGRDFKRSARVVNGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGHGQTDIGLSRRPGIVHVHAATATCERPNLLDPLQKSHRTWQSSIGTNTNNCRQEPEIGLTYSQLKGNETMVDEHNYGGLSNCMKESLDSTPLSRSEAILDLEFTLGRSSWQTEHAESSRELTLLKC* 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0463 332 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 332 IPR044847 GO:0000976|GO:0006355|GO:0010158
Apr9g0463 332 SUPERFAMILY Homeodomain-like 141 198 IPR009057 -
Apr9g0463 332 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 1 332 - -
Apr9g0463 332 Gene3D - 143 200 - -
Apr9g0463 332 Pfam Myb-like DNA-binding domain 145 196 IPR001005 -
Apr9g0463 332 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 144 197 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0463 Apr-Chr9 6434437 6438635 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0463 111 217 G2-like Transcription Factor Family AT5G42630 74.107 6.18e-52 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr9g0463 Myb_DNA-binding 1.4e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0463 - - gmx:106795723 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0463 9 6434437 6438635 Apr9g0463 9 6434437 6438635 ECH
Apr9g0463 9 6434437 6438635 Apr5g1552 5 19361628 19364947 PCT