Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0410 ATGGAAGACCAACACCGTGCTACCCTCCCTCCCGGTTGCCGGTTCCATCCCTCCGAAGAGCTTCTCCTCCGTTACTACTTAACCAACAAGAACGAAAACCGCGAAGGGGATTTCTACGGTTCTGATTTGATTCGGGAACTGGACCTCTACGGTTACGACCCTTTCGAATTACCGGACGCTGCGTGCTTTTCGTACGGTTACCGAGGGAGGAAGAGGCATTGGTTCTGTTACACCGTTAAGGTGCCTAAGCGCGGTACCAGGAAGGTGAAAAGTGGGTTCTGGCTTCGAAAGGGAAGGGTTCGCGATGTTTTCGGTAACGGTGGAAACGCCGTTTTGGGAACAAGGACACGTTTCGTTTTCTACGTTGGCAATTCCGTAAAAAGCGCTACCAGAACGGATTGGATTTTGTACGAATACGCATTGGTTGACCGTGTTTTGGCTTCATTTGCGCTCTGTCGCGTGTTTAATAAGCCTCATCAGAAGAATAGTCCATCGGAGATTGGTCTCAGTTGTTATGCGGAAGAGAGTGTGTCCGCGGTGCGTCATGTTGGGGTTCAGTGTGATGGATATGTTAGAAGTGATGTTGTTGAAGCTATTGTGTGTGATGATAACAGAAAGAATGAGATCACTGAGCTTCCAATTAGGTGTGGTGGTGAACATGATGATAGTGCCGCGCTACCAGTTTCCGTTGTTCAGGGTAGTCAACAGGAAAGGCTCTGTGGACTTCCTGGTGGCAGTGCATTTTTCATTGAAGCTGTGACATCTCAACAACTACTTTCCATTCTAGAGGAGGAGGATTTCATTGAATTGAATGATATTGCATGA 825 0.4788 MEDQHRATLPPGCRFHPSEELLLRYYLTNKNENREGDFYGSDLIRELDLYGYDPFELPDAACFSYGYRGRKRHWFCYTVKVPKRGTRKVKSGFWLRKGRVRDVFGNGGNAVLGTRTRFVFYVGNSVKSATRTDWILYEYALVDRVLASFALCRVFNKPHQKNSPSEIGLSCYAEESVSAVRHVGVQCDGYVRSDVVEAIVCDDNRKNEITELPIRCGGEHDDSAALPVSVVQGSQQERLCGLPGGSAFFIEAVTSQQLLSILEEEDFIELNDIA* 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0410 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 6 273 - -
Apr9g0410 274 ProSiteProfiles NAC domain profile. 9 157 IPR003441 GO:0003677|GO:0006355
Apr9g0410 274 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Apr9g0410 274 PANTHER NAC DOMAIN-CONTAINING PROTEIN 21/22-LIKE ISOFORM X1 6 273 - -
Apr9g0410 274 Pfam No apical meristem (NAM) protein 10 141 IPR003441 GO:0003677|GO:0006355
Apr9g0410 274 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0410 Apr-Chr9 5681517 5684430 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0410 6 157 NAC Transcription Factor Family AT5G64060 35.802 3.21e-22 92.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr9g0410 NAM 1.4e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0410 - - gmx:100785871 405.216
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0410 9 5681517 5684430 Apr9g0410 9 5681517 5684430 ECH