Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0399 ATGGCCGTGGAGCTTATAACGGGTTTTGGAAGCGATAGGAATAATAACAATGCAACGGCGGTGCAGGAAGCGGCTTCTGCTGGCATTCACAGCGTTGAGAAGCTCGTCGACATGATTTCCGGCACTGAGAAAAGTGATTCTGAATTCGGAGCCGTTGCTGACGTGGCGGTTAACCGGTTCAGAGAGGTTATTTCGCTCCTCGACAGGCCAAGAACCGGTCACGCTCGTTTCAGAAGGGCTCCTATAACAGTGCCACCTGTCCCTCTTCTTCAATTGCAACAGACGGTGAATGATTCAAAACCGAAAGCGCTTTCTTTTGTGCAGCAACTACAACATAATACAGAGCAAGCCTCTGCTTTCAAGGTTTATGACAACCAGAATCATCAGCAACGTTTTCTTCTCCATCAACAGCGTTTACCTTTGCCACCAAAGAATGAAACAAATGGTTCTGCCAACTCTTATATTTCTACATTAACGAGAGACACTGAAACTTTGCAACGCCCTTGTCACTCTTCGGGGTTTTCTAATGCGTGTAAACCGCCACTGTCATCAACTTCGGTGAAGAGAAAGTGCAATTCAACGGATTTTTCTACTCTCAAATGTGGATCGTCCTCTGCTAAGTGCCATTGCTCCAAGAAAAGGAAATTGAAGTTGAAGAGGGTGATCAGAGTACCGGCTATTAGTTCCAAGACTGCAGATATCCCACCCGATGAATATTCATGGAGAAAATATGGACAGAAACCTATCAAAGGCTCTCCACACCCGAGAGGTTATTACAAGTGTACAAGCGTGAGAGGTTGCCCAGCACGCAAACACGTGGAGCGTGCTGTGGACGATTCGAACATGCTGGTTGTTACCTACGAAGGAGATCATAGTCACTCCCACACCGCTTCTGAGATGGCCAATGTTGTTGTCCTTGAATCTTCCTAG 930 0.4667 MAVELITGFGSDRNNNNATAVQEAASAGIHSVEKLVDMISGTEKSDSEFGAVADVAVNRFREVISLLDRPRTGHARFRRAPITVPPVPLLQLQQTVNDSKPKALSFVQQLQHNTEQASAFKVYDNQNHQQRFLLHQQRLPLPPKNETNGSANSYISTLTRDTETLQRPCHSSGFSNACKPPLSSTSVKRKCNSTDFSTLKCGSSSAKCHCSKKRKLKLKRVIRVPAISSKTADIPPDEYSWRKYGQKPIKGSPHPRGYYKCTSVRGCPARKHVERAVDDSNMLVVTYEGDHSHSHTASEMANVVVLESS* 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0399 309 Pfam Plant zinc cluster domain 188 233 IPR018872 -
Apr9g0399 309 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 309 IPR044810 GO:0003700
Apr9g0399 309 Pfam WRKY DNA -binding domain 237 293 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0399 309 SUPERFAMILY WRKY DNA-binding domain 231 295 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g0399 309 SMART WRKY_cls 235 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0399 309 Gene3D WRKY domain 221 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g0399 309 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 14 309 - -
Apr9g0399 309 ProSiteProfiles WRKY domain profile. 230 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0399 Apr-Chr9 5515173 5516723 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0399 16 293 WRKY Transcription Factor Family AT2G24570 43.003 1.60e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g0399 WRKY 1.7e-25 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0399 - - aprc:113847417 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0399 9 5515173 5516723 Apr9g0399 9 5515173 5516723 ECH