Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0306 ATGCCAAAAATGAAGCATCTTCTGAGAAAGCTTCACATCGGAGGGGGCGCTGCCACTATCAATCACAATCACAACGCATTGCCTCACTCTCACACCACTCCATCTTCTTCCTCTCTTCCCTCTCCCACCGTGGTTTCCGATCCCAACCCTTCCCAAAACGACACTAACAACACCGTCGTTGATTTCAATCTATTGGAAGAGGAAGAGTTTCAGATGCAACTCGCTCTCGCAATTAGCGCTTCTGATTCCGATCCCGATCTCCACGACCCCGCCGAATCCGCACAGATCGATGCCGCCAAACAGATCAGCCTCGGTTACGCTGCTTCGCTCACTGACAAACAAGCCCTTGTTCAGTTTCAATCGCTTCGTTATTGGAACTACAATGTGATTGGTTATGATGAGAAAGTGATGGATGGGTTTTATGATGTTTATGGGATTACATCCAATTTGGCTGAACGGGGGAAGATGCCGTTGTTGGTGGATCTGCAAACTAAGCCTGTGTCGGGAGATGTTGATTGTGAAGTGGTTTTGGTGAACCGAGTGGTTGATGTTGAGCTTAGTCAGCTCGAGAGGAAAGCGTGTAGTTTGCTAGATGAGTGTTGTGTTTCTGGACTGGGACTGATTTTGAGTGGCTTGCTTCAGAAACTTGCTGATGTTGTTGTTAGTAGAATGGGTGGACCAGTTGGTAATGCTGATAAAATTACAAAAAGGTGGGCTATGAGGAGTTGTGAGTTACGAGATTCTTTGGGAACTATTGTCCTTCCCCTTGGCTGTCTTGATGTTGGACTTTCGCGTCACCGAGCCCTACTTTTTAAGGTACTGGCTGATAGGATTAATATTCCCTGCATGCTGGTAAAAGGGAGCTATTACACAGGAACTGATGATGGGGCTGTGAATTTGATTAAAGCTGATGATGGAAGTGAATACATTATTGATATGATGGGTGCTCCTGGCGCTCTTATTCCTGCTGAGGTGCCCAGCAGCCAGCTCCAAAATTGCAGTTTTGCTGTTAGGAGTTGTGCAGAGATTGTAGGACTACCCAACAACACACATTTGATGCTTGATGATAAACCTGCTGTGCCGGGAGTCTTGTCAGATTGTGGTGGAATTTCGACAGTGGGGAGGGTCCAGAGAGAAGAATTGTTAGCTATGGGCAGTCAAATGAAACCAGATGAAATAAATCATGTTAAAGTAAATGAAACTGGGAGATTTAATCGTACAGAAGCATATGAATGCTCATTACATGAAGAACCATCACCTGCAGAAAATATGCGTGTAAAAGATGTCTCCAAGTATGTTCTCAGTGCAGCAAGGAATCCAGAATTTGCCCAAAAGCTGCACAATGTTCTAGTAGAGAGTGGTGCCTTACTTCCTCCTGGTCTTTTTTCAGATATAAATCCCCAAGATAGGGGTGTAGATAAAGTAAATGAAAAAATTATTGTTGATAATGTTCAAGCTGATCCCAATAGATTGTTATTAAGCTATGAAAAGTCTCTCATAACCTCATATGGGGTGGGCTCTGCCAGCGATACTAGATTATGTCAATCTGCTGACTGGTTAGCTGATCAGCAAAAAGAGTTGCGAACAGATGCCGTTGAATTTTACAATTCTTTACATGGTGATAAGACAAGGAACAGCTTTGTAACTGTTTCTGACAGAGATAATGACTTAGAGCAATGTAATGCATTAAATGTTGATTCAGTTTCTATCAATTTGCATAGGATGTGTAAAGAAAAGGGTCCCAAATCTGCCTTACCCAGGACAGATCTCTCTTGCAAAAGACATAATGAGGATGATTGCTTTTGTGATTATGATGAAAATGGTCTTAGAAACCATGTTGGAGCTTCTTTTAATAACGTTGAATTGGGGAAAGGTTCAGCTGTTCAAATAAATGAGACACTGGTCAATGGAGATTGTGTCCTATATGATGGTAAAAATAAGGTTAACCCAGTACTTGGTGAAGGCTCAGAGTGGGAAATTCAATGGGAGGATCTTCGTATTGGGGAGCGTATTGGTATTGGTTCTTATGGTGAAGTTTACCGTGCTGATTGCAATGGCACTGAAGTTGCTGTAAAAAAGTTTCTACACCAAGATTTCTCTGGGGATGCACTAACTCAGTTCAAGTCTGAAGTTGAGATCATGTTAAGGTTGAGGCATCCTAATGTTGTACTCTTCATGGGAGCAATCACTCGCTCCCCACATTTCTCTATCTTGACAGAGTTTCTTCCAAGAGGCAGTTTATATAGGCTATTGCATCGTCCCAATCTTCGACTTGATGAGAAGAGACGGTTGCGCATGGCTCTTGATGTGGCTAAGGGAATGAACTACTTGCACACGAGCCATCCTCCTATTGTCCATCGAGATTTAAAGTCTCCAAATCTTCTTGTTGACAAGCATTGGGTTGTTAAGGTCTGTGATTTTGGTCTGTCACGGATGAAACACCATACATTTTTGTCATCGAAGTCTTGTGCTGGAACGCCTGAGTGGATGGCTCCAGAAGTCTTAAGAAATGAGCCAGCCAATGAGAAGTGTGATGTGTATAGTTTTGGTGTGATCTTGTGGGAGTTGACTACCACAAGGATTCCATGGAAGGGTTTGAACCCAATGCAGGTTGTTGGAGCTGTTGGATTCCAAAATAAACGGCTTGAAATTCCAGAAGATGTCAATCCTGTTGTAGCACAGATAATACATGATTGCTGGCAAACTAAACATGTTTGCCATCCCATGACATTCCAAGAGATTCACAATTCTTGGAAAAGTGATACTGGAAAGAAGCCATATTCTGGATACTCATTTGATGTCAGAAAAATTGAGGACAAATTTCCACCAGTGGAGCCACACTTGAGGCCATCATTCTCACAGCTGATGTCTCGTCTTTACCGTCTTCAACATTTGGTTGTCCAAAAAACGGGCTCAACACATTAA 2925 0.428 MPKMKHLLRKLHIGGGAATINHNHNALPHSHTTPSSSSLPSPTVVSDPNPSQNDTNNTVVDFNLLEEEEFQMQLALAISASDSDPDLHDPAESAQIDAAKQISLGYAASLTDKQALVQFQSLRYWNYNVIGYDEKVMDGFYDVYGITSNLAERGKMPLLVDLQTKPVSGDVDCEVVLVNRVVDVELSQLERKACSLLDECCVSGLGLILSGLLQKLADVVVSRMGGPVGNADKITKRWAMRSCELRDSLGTIVLPLGCLDVGLSRHRALLFKVLADRINIPCMLVKGSYYTGTDDGAVNLIKADDGSEYIIDMMGAPGALIPAEVPSSQLQNCSFAVRSCAEIVGLPNNTHLMLDDKPAVPGVLSDCGGISTVGRVQREELLAMGSQMKPDEINHVKVNETGRFNRTEAYECSLHEEPSPAENMRVKDVSKYVLSAARNPEFAQKLHNVLVESGALLPPGLFSDINPQDRGVDKVNEKIIVDNVQADPNRLLLSYEKSLITSYGVGSASDTRLCQSADWLADQQKELRTDAVEFYNSLHGDKTRNSFVTVSDRDNDLEQCNALNVDSVSINLHRMCKEKGPKSALPRTDLSCKRHNEDDCFCDYDENGLRNHVGASFNNVELGKGSAVQINETLVNGDCVLYDGKNKVNPVLGEGSEWEIQWEDLRIGERIGIGSYGEVYRADCNGTEVAVKKFLHQDFSGDALTQFKSEVEIMLRLRHPNVVLFMGAITRSPHFSILTEFLPRGSLYRLLHRPNLRLDEKRRLRMALDVAKGMNYLHTSHPPIVHRDLKSPNLLVDKHWVVKVCDFGLSRMKHHTFLSSKSCAGTPEWMAPEVLRNEPANEKCDVYSFGVILWELTTTRIPWKGLNPMQVVGAVGFQNKRLEIPEDVNPVVAQIIHDCWQTKHVCHPMTFQEIHNSWKSDTGKKPYSGYSFDVRKIEDKFPPVEPHLRPSFSQLMSRLYRLQHLVVQKTGSTH* 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0306 974 SUPERFAMILY Protein kinase-like (PK-like) 654 916 IPR011009 -
Apr9g0306 974 Gene3D Phosphorylase Kinase; domain 1 658 742 - -
Apr9g0306 974 Pfam Ethylene-responsive protein kinase Le-CTR1 118 321 - -
Apr9g0306 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Apr9g0306 974 MobiDBLite consensus disorder prediction 23 57 - -
Apr9g0306 974 SMART serkin_6 665 966 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0306 974 Gene3D Transferase(Phosphotransferase) domain 1 744 969 - -
Apr9g0306 974 PANTHER SERINE/THREONINE-PROTEIN KINASE EDR1 56 970 - -
Apr9g0306 974 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Apr9g0306 974 Pfam Protein tyrosine and serine/threonine kinase 665 916 IPR001245 GO:0004672|GO:0006468
Apr9g0306 974 MobiDBLite consensus disorder prediction 18 57 - -
Apr9g0306 974 ProSiteProfiles Protein kinase domain profile. 665 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0306 974 PANTHER SERINE-THREONINE PROTEIN KINASE 56 970 - -
Apr9g0306 974 CDD STKc_MAP3K-like 671 959 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0306 Apr-Chr9 3992367 4000072 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0306 589 973 MAP Kinase Kinase Kinase AT5G11850 65.544 3.99e-166 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Apr9g0306 PK_Tyr_Ser-Thr 9.8e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0306 K04424 - gmx:100779137 1464.51