Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0301 ATGTTCCTCTTTCAGGATCTCTCGCCTCTACTCCACATCTTCTCAGAATCGATTCTGCAAACCCTACACGAATCCGTTACGAGTTCTAGTTGCAAAAGCACGGAGTTGGAGCTATGCCGAGACGAATCAGCGGCGTTGGTTTTGAAATTCGTGGCGATGGCGTCGATTCTAATCGCGGGATTTGGGGGAATCGCGATTCCTTTAGCGGGGAAAGCGCGTGGGTTACTAGGAACAGAGGGAAACGCGTTTTTAGGAGCGAAAGCATTTGCAGCGGGGGTGATATTAGCGACGGGGTTCGTGCACATGCTGAAGGACGCGTCGGAAGCGCTGAAGGACCCGTGTTTGGGGTCTTACACGTGGTCTAAGTTTCCGTTTCCCGGTTTCTTCGCAATGATGTCAGCTTTGTTTACACTCCTTGTTGACTTTGTTGCGACTCGGTACTACGAGCGGAAACAGGGGCGTGGGAACGTTGAACACCGTGGGAAGGTTGTTGATGTGGTTGATGGTGAGGATGATGAGTCGGGAATAGTGGAAGTTATGGATGTTGGAATGGTGTTTGGGGAAGAGGGTAGCGGTGGACTGCACGTGGTTGGGATGCAACATGCTCACGCGCCTCGTCGTATACACTCCCCCACGCATGGGCATGCCCATGTTGGGAACTCCCCACACTACCATGATGATGTTGAAAGTACTGTCCGCCACGTCGTCGTTTCACAGGTATTGGAGCTTGGGATTGTGTCACATTCCATTGTAATTGGGCTATCCCTTGGAGTTTCGCAAAGCCCTTGTACCATGAGACCCCTAATTGTGGCATTGTCTTTCCATCAATTCTTTGAAGGGTTTGCACTTGGTGGTTGCATCTCCCAAGCCCAATTCAGAACCTTGTCATCAACAATAATGGCATGTTTTTTTGCACTAACAGCGCCACTGGGTGTTGCTATAGGGGCTTGTATTGCTTCAGTTTTTAACCCTTTTAGTCCAGGAGCACTCATCACAGAAGGCATCTTGGACTCCTTGTCAGCTGGAATCTTAGTGTATATGGCTTTAGTGGACTTAATAGCTGCTGATTTTCATAGCAAGAAAATGCGTTGTAACTTTAGGCTACAGATAATATGTTACTGTTTACTTTTTCTTGGGGCTGGATTGATGTCTTTACTTGCAATTTGGGCATGA 1173 0.4842 MFLFQDLSPLLHIFSESILQTLHESVTSSSCKSTELELCRDESAALVLKFVAMASILIAGFGGIAIPLAGKARGLLGTEGNAFLGAKAFAAGVILATGFVHMLKDASEALKDPCLGSYTWSKFPFPGFFAMMSALFTLLVDFVATRYYERKQGRGNVEHRGKVVDVVDGEDDESGIVEVMDVGMVFGEEGSGGLHVVGMQHAHAPRRIHSPTHGHAHVGNSPHYHDDVESTVRHVVVSQVLELGIVSHSIVIGLSLGVSQSPCTMRPLIVALSFHQFFEGFALGGCISQAQFRTLSSTIMACFFALTAPLGVAIGACIASVFNPFSPGALITEGILDSLSAGILVYMALVDLIAADFHSKKMRCNFRLQIICYCLLFLGAGLMSLLAIWA* 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0301 390 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 27 390 - -
Apr9g0301 390 PANTHER ZINC/IRON TRANSPORTER 27 390 - -
Apr9g0301 390 TIGRFAM zip: ZIP zinc/iron transport family 31 390 IPR004698 GO:0005385|GO:0016021|GO:0071577
Apr9g0301 390 Pfam ZIP Zinc transporter 48 387 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0301 Apr-Chr9 3928494 3932218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0301 10 390 Inorganic Solute Cotransporters AT1G60960 60.244 4.53e-160 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0301 K14709 - gmx:100809426 509.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0301 9 3928494 3932218 Apr5g1406 5 18167948 18169789 PCT