Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0289 ATGGTGTTCACAGAATTTGAATGGTTGTTTCATATTCCATGTGTCCCTTCTCTTTTAGCAATATTATTCACCCTCCTAGCTTTAGTAGGAGGATTATTGGGTTATCTCTATGGGCCCTATTGGGGTCTAAGGAAAGTTCCAGGCCCACCATCCCTGCCACTTGTAGGACACCTTCCCTTGCTGGCTAAGTATGGCCCTGATGTGTTCTCAGTCCTTGCCAAGGAATATGGCCCAATCTACAGATTTCATATGGGAAGACAACCACTAATCTTGGTAGCAGATCCAGAGCTTTGTAAAGAGGTGGGAATAAAAAAATTCAAAGACATTCCAAACAGAAGCATTCCCTCTCCCATTTCTGCTTCTCCTCTTCACCAAAAAGGACTCTTCTTCACCAGGGACTCACGATGGTCAACCATGAGAAACACCATATTGTCTGTGTACCAGCCATCACACTTAGCTAGCTTAGTGCCTACAATGCAATCATTTATAGAATCTACCACACAAAATCTTGACACCCCAAAGGATGACATAATCTTTTCCAATCTTTCCCTTAGGCTAGCTACTGATGTGATTGGAGAGGCAGCATTTGGTGTTAACTTTGGCCTCTCTAAGCCTCATTCAGTTTATGAATCAATCAAGAGTGTTAACAACAACAATGTACGGGATAATAAAGGTTATGATAGTAACAGTGATGATGAAGTATCCGATTTTATCAACCAACACATTTACTCAACAACACAGCTTAAGATGGATTTGTCTGGTTCCTTTTCCATCATACTTGGTCTAGTTGCACCAATACTTCAAGAGCCATTTAGGCAAATTTTGAAGAGAATACCAGGTACCATGGATTGGAAAATAGAGCGTACTAATGAAAAATTGAGTGGTCGTCTTGATGAGATTGTTAAAAAGAGAATGGAAGATAAGAAAAGGACTTCAAAAAACTTCTTGTCACTCATTCTTAATGCAAGAGAATCAAGGACAGTATCAGAAAATGTCTTCTCACCTGATTACATTAGTGCTGTTACCTATGAGCACTTACTTGCTGGGTCAGCTACCACATCCTTTACCTTGTCATCTATTGTATATTTGGTTGCCGGGCACCTAGAAGTTGAAAAAAAGTTGCTGCTAGAGATTGATGGATTTGGTCCAGTTGATAGGATACCTACTGCTCAAGATCTTCATGATAGTTTCCCTTATCTTGATCAGGTGATTAAAGAGGCCATGAGGTTTTACACTGTCTCCCCATTGGTTGCAAGAGAAACATCAAATGAGGTAGAGATAGGAGGTTACCTTCTTCCAAAGGGGACATGGGTTTGGCTAGCACTTGGAGTTCTAGCTAAAGACCCAAGGAACTTTCCTGAGCCAGAGAAGTTCAAACCAGAGAGGTTTGATCCCAAATGTGAAGAAATGAAACGAAGGCATCCTTATTCATTCATACCATTTGGAATTGGTCCCCGGGCTTGTATTGGTCAGAAATTTGCCCTACAAGAAATCAAGCTTACTCTCATTCATTTATACAGAAAATATGTGTTTCGTCATTCACTAAACATGGAAAAACCTATAGAACTGGAATATGTTGCAGTCTTGCAATCTCTTGGTTGA 1602 0.4039 MVFTEFEWLFHIPCVPSLLAILFTLLALVGGLLGYLYGPYWGLRKVPGPPSLPLVGHLPLLAKYGPDVFSVLAKEYGPIYRFHMGRQPLILVADPELCKEVGIKKFKDIPNRSIPSPISASPLHQKGLFFTRDSRWSTMRNTILSVYQPSHLASLVPTMQSFIESTTQNLDTPKDDIIFSNLSLRLATDVIGEAAFGVNFGLSKPHSVYESIKSVNNNNVRDNKGYDSNSDDEVSDFINQHIYSTTQLKMDLSGSFSIILGLVAPILQEPFRQILKRIPGTMDWKIERTNEKLSGRLDEIVKKRMEDKKRTSKNFLSLILNARESRTVSENVFSPDYISAVTYEHLLAGSATTSFTLSSIVYLVAGHLEVEKKLLLEIDGFGPVDRIPTAQDLHDSFPYLDQVIKEAMRFYTVSPLVARETSNEVEIGGYLLPKGTWVWLALGVLAKDPRNFPEPEKFKPERFDPKCEEMKRRHPYSFIPFGIGPRACIGQKFALQEIKLTLIHLYRKYVFRHSLNMEKPIELEYVAVLQSLG* 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0289 533 PANTHER THROMBOXANE-A SYNTHASE 18 530 - -
Apr9g0289 533 Pfam Cytochrome P450 47 523 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
Apr9g0289 533 Gene3D Cytochrome P450 37 532 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS P450 superfamily signature 402 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 SUPERFAMILY Cytochrome P450 40 529 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS E-class P450 group I signature 401 419 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS E-class P450 group I signature 441 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr9g0289 533 PANTHER CYTOCHROME P450 FAMILY PROTEIN 18 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0289 Apr-Chr9 3784303 3790573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0289 84 529 Cytochrome P450 AT2G26170 72.870 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0289 K20771 - gmx:100805689 929.858
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0289 9 3784303 3790573 Apr5g1398 5 18101210 18104501 PCT