Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0288 ATGGGTGCATCTGGAAAATGGGTAAAAGCATTAATCGGTCTTAAGAAGAGCCCAGACAACAAGGATGAACAAAAGGGTGTGAAGAGCAAGAGGTGGAGGTTATGGAAGAGTTCTTGTTCAAGTGAAATCAGAGGAAACCAATCTCATTCATTCAACGCCGCAGTGGCCACTGTGGTCAGAGCTGCACCTAAGGATTTCAAACTCGTCAAGCAAGAATGGGCTGCTACCAGAATCCAAACCGCTTTTCGCGCCTTCTTGGCAAGAAGGGCATTGAGGGCGTTGAAGGGAGTGGTGAGGCTTCAAGCTCTTGTACGAGGAAGACTAGTGAGGAAACAAGCTGCAGTGACATTGAGGTGCATGCAGGCCTTGGTTGGTGTTCAAGCACGAGTAAGAGCTCGTCGTGTTCGAATGTCCTTAGAAGGCCAAGCTGTGCAAAACATGCTCCATCAACGCCGCACCAATGCTGATCTCTTGAAAGAAGCCGAGGAAGGGTGGTGTGATAGCAAAGGAACATTGGCAGATGTTAAGACAAAATTACAAATGAGGCAAGAAGGGGCTTTCAAGAGAGAGAGAGCGCTTGCCTACTCTCTAGCCCATAAGCAATGGAGATCAACCCCCATTTCAAATTCAAGAGCAAATGCCTCATTTTCCTCTCTCAACAACCACCAAATAGACAAAGCTAACTGGGGATGGAGTTGGTTGGAACGTTGGATGGCAGCTAAGCCATGGGAGAGTAGATTAATGGAGCAAACAACCAATGTTGATACCTCAGATAAGACCACTCCACCACCTCCAAAGAAATGTGTGAACTCCTCAAATTCAAAAACATCAGAACCATTCTCAGTCAAAGTTAGAAAGAACAATGTCACCACAAGGATTTCTGCTAGACCTTCCCATGTTGGCCAAGCCACTAGATCATCCTCAAGTCCAAGTTCTGATTTTCAGTATGATGAGAGTTCTGTTTCATCTTCAATTTGCACATCTACAACGCCAATATCTGGGAATGTTGCATTGGCTTATGATAGGGTAGAGGACGGTAATAACACTAGGCCTAGTTACATGAACCTGACTGAGTCAACCAAGGCAAAGCAAAGAATGAATAATCATGAATATAATAGAGCTCAGAGGCAGAAATCCATGGATGAGTTTCAGTTTCTCAAAAGGACAGCAATTTTATCTAATGGGGATTCCAAAAGCATTGCTGATTATGACCCTTCAATCAACTTTTCTAGGCCTCTTTACTTACCAAACTACTTGGATAAGAGGCCAAGATGA 1275 0.4439 MGASGKWVKALIGLKKSPDNKDEQKGVKSKRWRLWKSSCSSEIRGNQSHSFNAAVATVVRAAPKDFKLVKQEWAATRIQTAFRAFLARRALRALKGVVRLQALVRGRLVRKQAAVTLRCMQALVGVQARVRARRVRMSLEGQAVQNMLHQRRTNADLLKEAEEGWCDSKGTLADVKTKLQMRQEGAFKRERALAYSLAHKQWRSTPISNSRANASFSSLNNHQIDKANWGWSWLERWMAAKPWESRLMEQTTNVDTSDKTTPPPPKKCVNSSNSKTSEPFSVKVRKNNVTTRISARPSHVGQATRSSSSPSSDFQYDESSVSSSICTSTTPISGNVALAYDRVEDGNNTRPSYMNLTESTKAKQRMNNHEYNRAQRQKSMDEFQFLKRTAILSNGDSKSIADYDPSINFSRPLYLPNYLDKRPR* 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0288 424 PANTHER IQ-DOMAIN 5-RELATED 1 422 - -
Apr9g0288 424 ProSiteProfiles IQ motif profile. 95 122 IPR000048 GO:0005515
Apr9g0288 424 MobiDBLite consensus disorder prediction 250 316 - -
Apr9g0288 424 Pfam IQ calmodulin-binding motif 95 112 IPR000048 GO:0005515
Apr9g0288 424 Pfam IQ calmodulin-binding motif 73 92 IPR000048 GO:0005515
Apr9g0288 424 SMART iq_5 93 114 IPR000048 GO:0005515
Apr9g0288 424 SMART iq_5 70 92 IPR000048 GO:0005515
Apr9g0288 424 Gene3D - 69 123 - -
Apr9g0288 424 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 1 422 - -
Apr9g0288 424 ProSiteProfiles IQ motif profile. 71 99 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0288 Apr-Chr9 3782840 3785437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0288 1 424 IQD Protein Family AT2G26180 57.859 5.75e-141 407
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0288 - - gmx:100787102 599.742
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0288 9 3782840 3785437 Apr5g1397 5 18098841 18100657 PCT