Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0280 ATGAATCCGCGCAAGGGCTCCAAGGTTTGGCTCGAGGACAGGGCTTCGGCTTGGGTGCCTGCTGAAGTGCTAGGTTCCGATGGTAAACGTGTTTTGCTCGAAACTGATTCTGGCAAGAAGGTTTTTGCTTCCCCGGAGAAACTGTTTCCGAGGGATGCGGACGAAGAGGAGCATGGGGGATTCGAAGATATGACGAGGTTGGCTTACTTGAATGAACCGGGAGTGTTGTTCAATCTTCGTAGAAGATATGAGCTCAATGATATCTATACGTATACAGGGAGCATTTTAATAGCTGTTAATCCCTTTACAAAGCTTCCTCATTTATATGATATCCATATGATGGAGCAGTATAAGGGAGCCCCATTGGGTGAGCTTAGCCCACATGTTTTTGCTGTTGCTGATGCATCATATAGAGCAATGATGAATGAAGGTAATAGTCAATCTATCTTGGTCAGCGGTGAGAGTGGTGCTGGAAAAACTGAGACAACAAAATTGATTATGCAGTATCTTACCTTTGTTGGTGGACGTGCTGCTGGTGATGATAGGACAGTTGAACAACAAGTTCTTGAATCCAATCCACTTTTAGAGGCATTTGGTAATGCAAGGACGGTTAGGAATGACAATTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTCGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCACGAGTGGTACAGATAACAGATCCAGAGAGAAATTACCACTGCTTTTATCAGTTGTGTGCATTTGAAAGGGATGCAGAGAGATATAAGTTAGGACATCCAAGTCACTTCCACTATTTAAATCAAAGTAAAATCTATGAACTAGATGGTGTAAACAATGCTGAAGAATACATGAAGACAAGGAGGGCAATGGATATTGTTGGCATCAGTAATGAGGATCAGGATGCCATATTTCGTGTCTTAGCTGCAATTTTACATTTGGGAAACATTGAATTTTCCCCTGGAAAAGAACACGACTCATCAGTTATAAAGGATGAAAAATCAAGATTTCATATGCAGATGGCTGCTAATCTTTTCATGTGTGATGTGGACCTATTACTAGCAACATTGTGCACTCGATCAATACAAACTCATGAAGGAAGTATTGTCAAGGCCCTTGATTGCAATGCTGCTGTAGCTGGCCGGGATGCTTTGGCAAAAACTGTTTATGCCCGTTTATTTGATTGGCTAGTTGATAAGATCAATAGGTCTGTTGGCCAAGATACCAATTCCCAGATACAGATAGGAGTTTTGGATATTTATGGTTTTGAGTGCTTTAAGGATAATAGTTTTGAGCAATTCTGCATCAATTTTGCAAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAAATGGAGCAGGAGGAGTATGCCAAAGAAGAAATTAATTGGAGTTACATTGAATTTGTAGACAACCAAGATGTTTTAGATTTGATCGAGAAGAAACCCATTGGTATCATTGCTCTTTTGGATGAAGCTTGCATGTTTCCGAAATCAACCCATGAAACATTTTCAACCAAGTTGTTTCAACATTTCCGCTCCCACCCTAGGTTGGAAAAGGAAAAATTTTCACAAACGGATTTTACCATGTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACTTTTATAGACAAAAATCGTGATTATGTTGTTGTAGAACATTGTAATCTATTATCTTCTTCAAAATGCCTCTTCGTTTCTGGCCTTTTTACGTTGCTACCAGAGGAGTCTTCAAGATCATCGTACAAGTTTTCTTCAGTAGCTTCCAGATTTAAGCAACAACTTCAAGCACTGATGGAGACCCTTAATTTGACGGAGCCTCATTACATACGATGTGTGAAGCCAAATTCATTGAATCGGCCACAGATGTTTGAGAATGCAAGTGTCATACACCAATTACGCTGTGGGGGTGTCCTTGAAGCTGTTCGTATAAGCCTGGCAGGTTACCCTACTAGAAGAACTTACTCAGAGTTTGTAGATCGCTTTGGGTTGATAGCGCCTGAATTTATGGATGGAAGTTATGATGATAAAGCTGCAACTGAGAAAATTTTGCAAAAGCTAAAGCTTGAGAATTTTCAGTTGGGTAGGACCAAAGTATTTCTCAGGGCTGGGCAAATTGGTATTTTAGACTCGAGACGTGCTGAAGTTTTAGACCATGCTGCAAAGTGTATTCAGTGCCGACTGAGGACATTTATTGCACACCGGGATTTTATCTCACTCAAAGCTGCTGCATTTTCTCTTCAGGCATGCTGCAGGGGATACATTGCACGAAAGTTATATACTGCTAAAAAGGAGACAGCATCAGCTATCTCCATTCAGAAATATATTCGAATGTGGCTTACTAGACATGCTTACTTGAAACTGTATTCATCTGCTATCATCATACAAGTCCATGTTCGAGGCTTTGTGATTCGCCAAAGATTCTTGCATGGAATAGAACATAGAGCTGCTACTTATATTCAGGCCTGTTGGAGGATGTCCAAGGTTAGGTCTGCTTTCCAGCTACGCCAAGCTTCTATTGTTGCAATACAATGCCTTTGGCGGTGTAGACAAGCAAAAAGAGAGTTGCGTAGACTTAAACAAGAGGCTAATGAAGCTGGTGCCCTCCGTTTAGCTAAAACTAAACTTGAGAAGCAATTGGAAGAGCTCACATGGCGTTTGCATCTTGAAAAGAAAATAAGGGTTTCTAACGAAGAGGCTAAGCAAACAGAGATCTCCAAACTTCAAAAGATGTTAGAAGCTCTTAATCTTGAATTAGATGCGGCTAAATTGGCAACAATTAATGAGTGCAACAAAAATGCAGTTCTGCAAAATCAATTGGAATTGTCAGTAAAGGAAAAAACTGCTTTAAAAAGAGAGCTAGCTGCAGTGGATGACTTACGAAAGGAAAATGCTTTATTGAAGATTTCATTGGATGCATTTGAAAAGAAGTACGCATCCTTAGAGCTTGAACTTATGAATGCTCAAAAAAGCCGAGATGAAACCATTGAGAAACTCAGGGAGTTTGAACACAAGTGCTCTCAACTTGAGCACAATGTGAAAAGCCTCGAGGAAAAGCTATTGAGTTTAGAGGATGAAAATCAAGTGCTTCGTCAGAAAGCCTTAAGTACTCCTAAGAGTAACCGACTGGGTTTTGCCAAGTCATTGTCAGAAAAATACTCTAGTGGAATATCATCCCGCTCTGAACGAAAGACCATATTTGAGTCACCCACGCCCACAAAACTTATTGCTCCACCCACACTAGGTTTGTCAGACTCTCGTCGATCTAAGTTAACAGTAGAGAGGCACCAGGATAACTATGAATTCCTCTCTAGGTGTATCAAAGAAAATTTGGGATTCAAAAATGGTAAACCGATTGCAGCTCGTATCATATACAAATGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATTTTTGATTCCATCATTGAAGGCATAAATGAAGTTCTAAAGGTTAGGGATGATGACATTGTCTTGCCATATTGGCTGTCCAATACCTCTGCACTTCTATGCCTTTTACAGAGGAACTTACATTCAAATGGCTTTTTAGCTACCACTGCTCAACGTTATCCTGGATCATCTGGCTTGACCAGTCGGACTGGGCATGGACCAAAATCTCCATTAAAACTTATTGGATATGATGATGGTGTATCGCATGTGGAGGCGAGATATCCAGCTATTCTTTTTAAGCAACAACTAACTGCATGTGTGGAGAAGATTTTTGGTCTTCTACGTGACAATTTAAAAAAGGAACTTTCTCCACTTTTGGGATCATGTATTCAGGCACCCAAAACAGGACGAGTGCATGGCGGAAAATCATCTAGATCTCCTGGAGGGCTTCCTCACCAATCATCTGGTGGTCAGTGGGTCAACATTGTCAAATTTTTGGATTCACTCATGAGCAAACTTTGTGGAAATCATGTGCCATCCTTCTTCATCCGTAAGCTAGTTACCCAGGTGTTTTCCTTCATCAATATTACACTCTTCAACAGTCTTCTTTTGCGTCGTGAATGTTGCACATTCTCAAATGGTGAATATGTGAAGTCTGGTCTAGCAGAACTGGAGAAATGGATAGTCAATGCCAAAGAAGAGTATGCAGGAACATCTTGGCATGAGCTGAATTATATACGACAAGCTGTTGGGTTCTTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAAATTTGTCAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATCTACCGAATCAGCACTATGTACTGGGATGACAAGTATGGAACCCAAAGTGTGTCTAATGAGGTAGTTAGTGAAATGAGGGAAATTGTCAGCAAGGACAATCAGAATCTGACCTCAAATTCTTTCTTATTGGATGACGATCTGAGCATTCCATTCTCTGCCGAAGATATAGATATGGCAATTCCTGCCATAGATCTTGATGAGATTGATCTTCCAGAATTTGCGTCTGAATATTCTTGTGCTCAGTTTCTTAGTTCACATCAGAAGTAA 4548 0.4035 MNPRKGSKVWLEDRASAWVPAEVLGSDGKRVLLETDSGKKVFASPEKLFPRDADEEEHGGFEDMTRLAYLNEPGVLFNLRRRYELNDIYTYTGSILIAVNPFTKLPHLYDIHMMEQYKGAPLGELSPHVFAVADASYRAMMNEGNSQSILVSGESGAGKTETTKLIMQYLTFVGGRAAGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCAFERDAERYKLGHPSHFHYLNQSKIYELDGVNNAEEYMKTRRAMDIVGISNEDQDAIFRVLAAILHLGNIEFSPGKEHDSSVIKDEKSRFHMQMAANLFMCDVDLLLATLCTRSIQTHEGSIVKALDCNAAVAGRDALAKTVYARLFDWLVDKINRSVGQDTNSQIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYAKEEINWSYIEFVDNQDVLDLIEKKPIGIIALLDEACMFPKSTHETFSTKLFQHFRSHPRLEKEKFSQTDFTMSHYAGKVTYHTDTFIDKNRDYVVVEHCNLLSSSKCLFVSGLFTLLPEESSRSSYKFSSVASRFKQQLQALMETLNLTEPHYIRCVKPNSLNRPQMFENASVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIAPEFMDGSYDDKAATEKILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDHAAKCIQCRLRTFIAHRDFISLKAAAFSLQACCRGYIARKLYTAKKETASAISIQKYIRMWLTRHAYLKLYSSAIIIQVHVRGFVIRQRFLHGIEHRAATYIQACWRMSKVRSAFQLRQASIVAIQCLWRCRQAKRELRRLKQEANEAGALRLAKTKLEKQLEELTWRLHLEKKIRVSNEEAKQTEISKLQKMLEALNLELDAAKLATINECNKNAVLQNQLELSVKEKTALKRELAAVDDLRKENALLKISLDAFEKKYASLELELMNAQKSRDETIEKLREFEHKCSQLEHNVKSLEEKLLSLEDENQVLRQKALSTPKSNRLGFAKSLSEKYSSGISSRSERKTIFESPTPTKLIAPPTLGLSDSRRSKLTVERHQDNYEFLSRCIKENLGFKNGKPIAARIIYKCLLHWHAFESERTAIFDSIIEGINEVLKVRDDDIVLPYWLSNTSALLCLLQRNLHSNGFLATTAQRYPGSSGLTSRTGHGPKSPLKLIGYDDGVSHVEARYPAILFKQQLTACVEKIFGLLRDNLKKELSPLLGSCIQAPKTGRVHGGKSSRSPGGLPHQSSGGQWVNIVKFLDSLMSKLCGNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEICQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDLDEIDLPEFASEYSCAQFLSSHQK* 1516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0280 1515 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 4 53 IPR004009 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 ProSiteProfiles IQ motif profile. 803 832 IPR000048 GO:0005515
Apr9g0280 1515 PANTHER PROTEIN OPAQUE1-LIKE 3 1512 - -
Apr9g0280 1515 Gene3D Myosin VI head, motor domain, U50 subdomain 308 598 - -
Apr9g0280 1515 SMART iq_5 850 872 IPR000048 GO:0005515
Apr9g0280 1515 SMART iq_5 754 776 IPR000048 GO:0005515
Apr9g0280 1515 SMART iq_5 827 849 IPR000048 GO:0005515
Apr9g0280 1515 SMART iq_5 802 824 IPR000048 GO:0005515
Apr9g0280 1515 SMART iq_5 731 753 IPR000048 GO:0005515
Apr9g0280 1515 SMART iq_5 779 801 IPR000048 GO:0005515
Apr9g0280 1515 Pfam DIL domain 1334 1437 IPR002710 -
Apr9g0280 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 828 883 IPR027417 -
Apr9g0280 1515 Gene3D - 828 879 - -
Apr9g0280 1515 Gene3D - 731 780 - -
Apr9g0280 1515 Gene3D - 781 827 - -
Apr9g0280 1515 CDD MyosinXI_CBD 1109 1481 IPR037975 GO:0007015
Apr9g0280 1515 PRINTS Myosin heavy chain signature 89 108 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 PRINTS Myosin heavy chain signature 146 171 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 PRINTS Myosin heavy chain signature 193 220 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 PRINTS Myosin heavy chain signature 425 453 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 PRINTS Myosin heavy chain signature 478 506 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 ProSiteProfiles IQ motif profile. 780 806 IPR000048 GO:0005515
Apr9g0280 1515 ProSiteProfiles IQ motif profile. 828 857 IPR000048 GO:0005515
Apr9g0280 1515 ProSiteProfiles IQ motif profile. 851 880 IPR000048 GO:0005515
Apr9g0280 1515 Coils Coil 864 894 - -
Apr9g0280 1515 Gene3D - 249 306 - -
Apr9g0280 1515 Coils Coil 972 1048 - -
Apr9g0280 1515 Pfam IQ calmodulin-binding motif 782 800 IPR000048 GO:0005515
Apr9g0280 1515 Pfam IQ calmodulin-binding motif 805 823 IPR000048 GO:0005515
Apr9g0280 1515 Pfam IQ calmodulin-binding motif 757 775 IPR000048 GO:0005515
Apr9g0280 1515 Pfam IQ calmodulin-binding motif 829 849 IPR000048 GO:0005515
Apr9g0280 1515 ProSiteProfiles Dilute domain profile. 1158 1458 IPR002710 -
Apr9g0280 1515 CDD MYSc_Myo11 73 717 IPR036018 -
Apr9g0280 1515 ProSiteProfiles Myosin motor domain profile. 59 729 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 779 IPR027417 -
Apr9g0280 1515 Coils Coil 913 940 - -
Apr9g0280 1515 Gene3D - 664 730 - -
Apr9g0280 1515 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 778 824 IPR027417 -
Apr9g0280 1515 SMART MYSc_2a 53 730 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 Pfam Myosin head (motor domain) 62 717 IPR001609 GO:0003774|GO:0005524|GO:0016459
Apr9g0280 1515 SMART DIL_2 1333 1440 IPR002710 -
Apr9g0280 1515 Coils Coil 948 968 - -
Apr9g0280 1515 ProSiteProfiles IQ motif profile. 755 784 IPR000048 GO:0005515
Apr9g0280 1515 PANTHER MYOSIN 3 1512 - -
Apr9g0280 1515 Gene3D Kinesin motor domain 62 659 IPR036961 -
Apr9g0280 1515 MobiDBLite consensus disorder prediction 1283 1302 - -
Apr9g0280 1515 Gene3D - 435 620 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0280 Apr-Chr9 3685565 3711507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0280 1 1510 Myosins gene family AT4G33200 72.914 0.0 2257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0280 K10357 - gmx:100790815 2742.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0280 9 3685565 3711507 Apr5g1358 5 17792697 17818613 PCT