Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0270 ATGAATTTCAAGAACAGCCCTCAAATTCCGCAAAAGGGGTCTTCTCTATACCTATCTAGGCAATCATCCAATTCCGATTCGAGGGCCAACCCACAGAAGAATGTGGAGCCACCTAGCCCTCTAATGGTTGGATGCTGCGGAGGCTTCACCAATGTGAAAACTACGGGCTCCTCTGCCTCCAAATCACAACATCTACACCAGCTACAATGCCAAAAGCTGGAAGTAAAGGTTGCAGATTTGGAAAGGGAAGTGCAAAAGCAGACAGAACTAGGAGTGCGGTACAGGAAAAGAATGGAAAAGACGCAAGAATACTTAAGGTATTGCCTTCAGATAGCACAGAAAAATGGAATATTGGACCTCATTATCAACTACAAAGCTGAACTTCAACAATCTCCACTCTCCCTCAGCTCCATTACCAGCCCTCAAATTCCTATTACTCCATCACATAATCACCACCCCAATTTAGCTGCCATCATCGATCAAGCTAAATTGAATGGATGGTATATTGATCCAACTGAGATTGAATTGGAAGAGAAAATCGGGGAGGGAAGTACAGCAGATATTTACAGGGGAACATGGCGAGGAATTGAGGTAGCAGTGAAGTGCATATCTCGAGAGTTCTTCCGCACAAACCAAAACGGCGTCGTTTACTTCTCTCAGGAGCTCGAAACACTGTCGAGGCAGCGCCACAGGTTTGTGCTTCAGCTGATGGGCGCGTGTCTTGATCCTCCCCACCGCGCGTGGGTCGTCACGGAGTATCTTCATACCACGCTGAAGGAGTGGCTGCATGGGCCTGGCAACAGGCGCAGAGAGAGAATGGTGCCACTTCCACCTTTCAAATATAGATTGATGCGGGCCTTAGAAATAGCCCAAGCCATGCAGTATTTGCATGAACAGAAGCCCAAAGTCATTCATCGTGACTTGAAGCCCACCAATATTTTCCTCGACGATGCCATGCACATTAGGGTCGCTGATTTTGGTCACGCTCGCTTCTTGGATGACGAGGAAATGGCCCTCACCGGAGAAACAGGGACATACGTGTACATGGCACCAGAGGTGATCCGGTGTGAACCTTATAATGAAAAATGTGATGTGTATAGTTTTGGTGTCATATTGAATGAATTAGTAACTGGAAATTACCCCTACGTTGAGACGGAATACGGTCCCACCAAGATTGCCATGGAAGTTGTGGAGGGTAAGCTGAGACCTCAGCTTCCATGCGGTGACGTTGGCCAACTGGGAGTGCTAATTCACCTTATCTGTCTTTGCTGGGATACAAATCCGTCTACTCGACCATCTTTCGCCATAATCACCAGTACTCTCAAAAGTTATGCCAACAAGATGCTCCTTTAA 1353 0.4701 MNFKNSPQIPQKGSSLYLSRQSSNSDSRANPQKNVEPPSPLMVGCCGGFTNVKTTGSSASKSQHLHQLQCQKLEVKVADLEREVQKQTELGVRYRKRMEKTQEYLRYCLQIAQKNGILDLIINYKAELQQSPLSLSSITSPQIPITPSHNHHPNLAAIIDQAKLNGWYIDPTEIELEEKIGEGSTADIYRGTWRGIEVAVKCISREFFRTNQNGVVYFSQELETLSRQRHRFVLQLMGACLDPPHRAWVVTEYLHTTLKEWLHGPGNRRRERMVPLPPFKYRLMRALEIAQAMQYLHEQKPKVIHRDLKPTNIFLDDAMHIRVADFGHARFLDDEEMALTGETGTYVYMAPEVIRCEPYNEKCDVYSFGVILNELVTGNYPYVETEYGPTKIAMEVVEGKLRPQLPCGDVGQLGVLIHLICLCWDTNPSTRPSFAIITSTLKSYANKMLL* 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0270 450 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 39 448 - -
Apr9g0270 450 Coils Coil 63 90 - -
Apr9g0270 450 Pfam Protein kinase domain 175 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0270 450 PANTHER OS09G0443600 PROTEIN 39 448 - -
Apr9g0270 450 CDD STKc_MAP3K-like 180 441 - -
Apr9g0270 450 SMART serkin_6 174 442 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0270 450 Gene3D Transferase(Phosphotransferase) domain 1 277 449 - -
Apr9g0270 450 SUPERFAMILY Protein kinase-like (PK-like) 153 438 IPR011009 -
Apr9g0270 450 ProSiteProfiles Protein kinase domain profile. 174 449 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0270 450 Gene3D Phosphorylase Kinase; domain 1 162 255 - -
Apr9g0270 450 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672|GO:0006468
Apr9g0270 450 ProSitePatterns Protein kinases ATP-binding region signature. 180 201 IPR017441 GO:0005524
Apr9g0270 450 MobiDBLite consensus disorder prediction 1 39 - -
Apr9g0270 450 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0270 Apr-Chr9 3546198 3549013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0270 165 442 MAP Kinase Kinase Kinase AT2G17700 37.011 2.46e-48 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-8 Apr9g0270 Pkinase 7.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0270 - - gmx:102666416 712.22