Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0267 ATGATTTCGAGTCCAACCGAAGAAGATTCAGCTTCAGCAACGTCAATCTCAGAGGCCCAATTGCATGCCCCAGAAGACATAAATTGGCACATGCTCGACAAATCAAAGTTCTTCTTCCTCGGAGCAACCTTATTCTCCGCTCTATCAGCAGCTCTCTACCCCGTTGTCGTGTTGAAGACGCGTCAGCAAGTCTCCTCAGCAAAAATCTCTTGCCGAAACATGTCCTCTGCTATCATGCGCTACGAGGGTTTCCGAGGTTTCTACAGAGGTTTTGGCACTTCCTTAATTGGAACAATTCCCGCACGTGCGCTTTACATGTCAGCACTCGAAGTCACCAAAACCAACGTTGGCACCGCCACCGTTCGTTTGGGTTTCTCCGACGCCTCTGCCACTGCCATAGCTAATGCCGCTGGTGGGGTCGCTTCTGCCATGGCTGCGCAACTGGTGTGGACCCCAGTTGATGTCGTCAGCCAAAGACTCATGGTTCAAGGAACCAACAAAAACAACGTTGCACACGGTCTTCATTATAGAAACGGTTTCGATGCTTTCAAGAAAATTTTGTGCGTTGATGGGCTAAGAGGGTTTTATAGGGGGTTTGGGGTGTCCATTGTGACTTACGCGCCTTCTAACGCGGCTTGGTGGGCTTCGTATTCGATGGTGCATAGGGTCATTTGGGGTGGTTTTGGGTGTTGCGTGGGTGATGATTACAAGGTAAATTTGGGTGTGCAAGGGTTGAGTGCGGTTATGGCGAGTGGGGTTTCAGCAATTGTGACTATGCCACTTGATACTATTAAGACGAGGTTGCAAGTGTTGGATTCGGTCGAGAATGGACGAAAGAGGCCAATGACTTTTGTGCAAACGGTTAAGAATTTGGTGGGGGAAGGTGGAATTTTGGGTTGTTACAGAGGATTGGGACCAAGGTGGGCTTCAATGTCTCTGTCTGCAGCCACCATGGTTACTACCTACGAGTTCTTGAAACGCATGTCTGCTAAGAATCTAGACAGTTAA 1008 0.4891 MISSPTEEDSASATSISEAQLHAPEDINWHMLDKSKFFFLGATLFSALSAALYPVVVLKTRQQVSSAKISCRNMSSAIMRYEGFRGFYRGFGTSLIGTIPARALYMSALEVTKTNVGTATVRLGFSDASATAIANAAGGVASAMAAQLVWTPVDVVSQRLMVQGTNKNNVAHGLHYRNGFDAFKKILCVDGLRGFYRGFGVSIVTYAPSNAAWWASYSMVHRVIWGGFGCCVGDDYKVNLGVQGLSAVMASGVSAIVTMPLDTIKTRLQVLDSVENGRKRPMTFVQTVKNLVGEGGILGCYRGLGPRWASMSLSAATMVTTYEFLKRMSAKNLDS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0267 335 Pfam Mitochondrial carrier protein 131 224 IPR018108 -
Apr9g0267 335 Pfam Mitochondrial carrier protein 46 115 IPR018108 -
Apr9g0267 335 Pfam Mitochondrial carrier protein 240 332 IPR018108 -
Apr9g0267 335 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 15 334 - -
Apr9g0267 335 SUPERFAMILY Mitochondrial carrier 30 325 IPR023395 -
Apr9g0267 335 Gene3D Mitochondrial carrier domain 34 334 IPR023395 -
Apr9g0267 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 238 328 IPR018108 -
Apr9g0267 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 130 223 IPR018108 -
Apr9g0267 335 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER-LIKE PROTEIN 15 334 - -
Apr9g0267 335 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 115 IPR018108 -
Apr9g0267 335 PRINTS Mitochondrial carrier protein signature 90 110 IPR002067 GO:0055085
Apr9g0267 335 PRINTS Mitochondrial carrier protein signature 196 214 IPR002067 GO:0055085
Apr9g0267 335 PRINTS Mitochondrial carrier protein signature 247 269 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0267 Apr-Chr9 3494201 3495220 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0267 7 332 Chloroplast and Mitochondria Gene Families AT5G26200 62.763 8.29e-152 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0267 K15121 - gmx:100797365 488.419