Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0263 ATGGAGGTGATGTCGTTCGTGGTTGCAGTGCCATTAAGAGTAGGTAATTTGGTCTGTGATAACCCAACCACAGCTACCCACATGGATGTATCCGGATTTAAGCTGATGGCAGATACAGGGCTGTTATCTAATTCTGTGACTGTTTCCACGGTTATAGGTTCTGATGATTGTCATAATAGTTGCAGTTTGGAGGATGAAGTTGGTATTACTGAAGCTGTGCCACCAAAACAGGATAGGGAAGGAGAGAGTCCTTTATTGGATATGATATCCCAAAATAGAAGCTCTTTGGTTGCCAGTGATGAAGTGTTAATTGAGGAGGATGATTCATTGTCATTGGAAGGTGACCAGGTTGTTGATAGCTCATGTTCTCTTTCGGCAGTCAGTGAGAACAGTAGTGTGTGTGGAGAGGAGTCCTTCAGTTTTGATGCCGCTTCAGATGTTGGGACACCGTGTTCCACAGACGTAGAGAAGAGCATCTGTGCTGTCAATATTGTTGCCCCCCAGGCAGTTGGCTTGGGGGAGTCGAATGCTGACACCGATATTATGAGTGAACCTCTTGCTGTGGCAGTGAGTCTTGAAGAAGAGACTGGAGTTGGATCTTGCCCAAAGCCTTCTACAGTTGTTCTTAATCAGTTCCCTCAGGAAAAGGGTGTGAGTGGAACTGTTGGTCGGAGTGTTTTTGAATTGGATTATACTCCACTTTGGGGATTCATATCTCTCTGTGGAAGAAGACCTGAGATGGAAGATGCATTTGCCACTGTTCCTCGATTTTTGAAAATTCCCATTCAAATGCTAGTTGGTGACCAGGTGCTTGATGGAATGAACAAGTGTTTTAGTCAGCAGATGACCCATTTCTTTGGAGTCTATGATGGCCATGGTGGCTCTCAGGTGGCAAAGTATTGTCGTGATCGTATCCACTTGTCCTTGGCTGAGGAAATAGAATTTGTCAAAGAAGGTCTAATTAGTGGAAGTATCAAGGATGGTTGTCAAGATCAGTGGAAAAAAGTTTTCACCAACTGTTTCTTGAAGGTTGATGCTGAAGTTGGAGGAAAAGTTGGTAATGAACCCGTTGCCCCAGAAACTGTTGGCTCCACTGCAGTTGTTTCTGTAATCTGTTCATCTCATATCATAGTTGCAAATTGTGGTGATTCAAGAGCGGTTTTATGTCGTGGCAAAGAACCCATGGCATTATCAGTGGACCATAAACCAAACCGAGATGATGAATATGCAAGAATTGAGGCAGCTGGAGGAAAGGTGATTCAATGGAATGGCCATCGTGTATTTGGTGTTCTTGCAATGTCAAGGTCTATTGGTGATAGATATTTGAAGCCATGGATTATTCCAGAACCAGAAGTTACGTTTCTTCCACGCACAAAGGATGATGAATGTCTCATTTTGGCCAGTGATGGTCTGTGGGATGTTATGTCGAATGAAGAGGTGTGTGACCTCGCTAGGAGACGAATACTTCTCTGGTACAAGAAAAATGGCATGGAACTACTCTCAGAAAGGGGAGAGGGAGTTGATCCTGCTGCACAAGCAGCAGTCGAGTGCCTGTCAAACCGCGCGCTTCAGAAAGGAAGCAAAGATAACATCACAGTGATTGTGGTTGATTTGAAACAAAGAAAATATAAGAGCAAGACATGA 1644 0.4398 MEVMSFVVAVPLRVGNLVCDNPTTATHMDVSGFKLMADTGLLSNSVTVSTVIGSDDCHNSCSLEDEVGITEAVPPKQDREGESPLLDMISQNRSSLVASDEVLIEEDDSLSLEGDQVVDSSCSLSAVSENSSVCGEESFSFDAASDVGTPCSTDVEKSICAVNIVAPQAVGLGESNADTDIMSEPLAVAVSLEEETGVGSCPKPSTVVLNQFPQEKGVSGTVGRSVFELDYTPLWGFISLCGRRPEMEDAFATVPRFLKIPIQMLVGDQVLDGMNKCFSQQMTHFFGVYDGHGGSQVAKYCRDRIHLSLAEEIEFVKEGLISGSIKDGCQDQWKKVFTNCFLKVDAEVGGKVGNEPVAPETVGSTAVVSVICSSHIIVANCGDSRAVLCRGKEPMALSVDHKPNRDDEYARIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVTFLPRTKDDECLILASDGLWDVMSNEEVCDLARRRILLWYKKNGMELLSERGEGVDPAAQAAVECLSNRALQKGSKDNITVIVVDLKQRKYKSKT* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0263 547 ProSitePatterns PPM-type phosphatase domain signature. 285 293 IPR000222 GO:0043169
Apr9g0263 547 SUPERFAMILY PP2C-like 228 539 IPR036457 -
Apr9g0263 547 CDD PP2Cc 239 538 IPR001932 -
Apr9g0263 547 PANTHER ALPHABET, ISOFORM E-RELATED 97 547 - -
Apr9g0263 547 ProSiteProfiles PPM-type phosphatase domain profile. 234 538 IPR001932 -
Apr9g0263 547 Gene3D - 221 547 IPR036457 -
Apr9g0263 547 Pfam Protein phosphatase 2C 264 531 IPR001932 -
Apr9g0263 547 PANTHER PROTEIN PHOSPHATASE 2C FAMILY PROTEIN 97 547 - -
Apr9g0263 547 SMART PP2C_4 224 536 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0263 Apr-Chr9 3456139 3461463 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0263 99 547 PP2C-type Phosphatase Gene Family AT1G17550 52.928 3.61e-158 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0263 K14497 - gmx:100805281 905.205