Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0258 ATGACTACTAAGAAGATTACATGGAAGTCTGTTATCTTGATCTTAAGTTGTTACAAGGTTAAATGTCCCTTGGAGGAATCAGAGAAGCAGGTTTTAAAACAAGGTTCTTTGCAGAGGCTATGTCTATCAGATGTAAGCAATTCAAGCTCCACTCAGGCAATAGAGGATCTTTCAATTTCCCTTGTTGGCTCAAAACTTTATACATTCACACTTGAGGAGCTAAGGGAAGCAACACATAATTTCTCATGGAGTAATATGCTTGGTGAAGGTGGGTTTGGACCCGTGTACAAAGGTTTTGTTGATGACAAACTCAGGTCTGGTTTGAAAGCTCAAACTGTAGCTGTAAAAAGATTGGACTTGGATGGCTTGCAAGGTCATAGGGAGTGGCTGGCAGAGATTATATTTCTTGGACAGCTCAGGCATCCACATCTTGTCAAGTTAATTGGGTACTGTTATGAGGATGAACACAGACTTTTGGTGTATGAATGCATGCCAAGAGGCAGCTTGGAGGATCAACTCTTCAGAAGATACTCAGCTGCTATGCCATGGTCAACCAGGATGAAAATTGCATTAGGAGCAGCCAAGGGCCTGGCCTTCCTTCACGAAGCAGATCAACCTGTAATATATAGGGATTTCAAAGCTTCAAACATCTTACTAGACTCAGATTTCACAGCTAAACTCTCAGATTTTGGTCTAGCTAAGGATGGCCCTGAAGGGAAAGACACACATGTGACAACACGCATAATGGGAACACAAGGCTATGCTGCTCCTGAATACATCATGACAGGTCACCTCACAACAAAGAGTGATGTGTATAGCTATGGAGTGGTTCTGTTGGAATTGCTCACAGGAAGACGCGTAGTCAATAAGTCGCGGTCTAATGGAGGGAAGAGCTTGGTGGAATGGGCAAGGCCTTTGTTGAGAGATCAAAAGAAGCTTTATGGTATCATAGACAGTAGATTGGAAGGACAATTTCCTACGAAAGGAGCCATGAAAGTTGCTATGTTGGCCTTCAAATGCTTGAGTCACCACCCAAATCCAAGGCCCTCTATGAGTGATGTGGTGAAGGTGTTGGAGCCACTTCAAGACTTCGATGATGTTTTCATTGGACCATTTGTGTATGTTGCCGTAAGTGAAAACGGTGACAAAGATAAAATATAG 1161 0.4281 MTTKKITWKSVILILSCYKVKCPLEESEKQVLKQGSLQRLCLSDVSNSSSTQAIEDLSISLVGSKLYTFTLEELREATHNFSWSNMLGEGGFGPVYKGFVDDKLRSGLKAQTVAVKRLDLDGLQGHREWLAEIIFLGQLRHPHLVKLIGYCYEDEHRLLVYECMPRGSLEDQLFRRYSAAMPWSTRMKIALGAAKGLAFLHEADQPVIYRDFKASNILLDSDFTAKLSDFGLAKDGPEGKDTHVTTRIMGTQGYAAPEYIMTGHLTTKSDVYSYGVVLLELLTGRRVVNKSRSNGGKSLVEWARPLLRDQKKLYGIIDSRLEGQFPTKGAMKVAMLAFKCLSHHPNPRPSMSDVVKVLEPLQDFDDVFIGPFVYVAVSENGDKDKI* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0258 386 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Apr9g0258 386 SUPERFAMILY Protein kinase-like (PK-like) 57 359 IPR011009 -
Apr9g0258 386 Gene3D Transferase(Phosphotransferase) domain 1 164 368 - -
Apr9g0258 386 PANTHER KINASE 1B 21 383 - -
Apr9g0258 386 CDD STKc_IRAK 87 361 - -
Apr9g0258 386 PANTHER OS01G0588500 PROTEIN-RELATED 21 383 - -
Apr9g0258 386 Gene3D Phosphorylase Kinase; domain 1 42 162 - -
Apr9g0258 386 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Apr9g0258 386 ProSiteProfiles Protein kinase domain profile. 81 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0258 Apr-Chr9 3403120 3405744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0258 68 358 Glycoside Hydrolase AT3G07070 53.401 1.50e-101 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr9g0258 PK_Tyr_Ser-Thr 1.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0258 - - gmx:100802636 720.309