Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0253 ATGTCTGGTGCTGATCCTACTTGTTACAGTATTGACTCGTGTTCTGCCAATAACAACAACACTAGTAGTAAGATGTACAAAGGGGTGAGAAAGAGAAAATGGGGCAAATGGGTATCTGAAATTAGGCTTCCCAATAGCCGTGAGCGCATATGGTTGGGCTCTTATGATACCCAAGAGAAAGCTGCTAGGGCCTTTGATGCAGCCCTTTATTGCCTACGTGGCAAAAGTGCAAGTTTCAATTTCCCTGACACCCCTCTTAACTTGGACATCAATGTGCCTCACCAATCTCTTTCCCCGCAGGAAATTCAAGAGGTAGCGGCTAAGTTTGCCAACAACCACCCACCTTTGGAGAGTGCTCAAGAGGAACCATTGTTAGAGTCACAAAGTGGTGGTGATCATTCATTTGGGTTGTTTGAATCCAATAAATCTAAGTCCAACCCCGAGAGTAGTTCTTTGTCAATCCCTATGTATGATTGTGATTATGGGACCATGCAAGTGGACCATGGGGACTTAGAGGCCACGGATTGGACATTTTTTAACATGTTGGATGACTTGAATGGCTCCGATTTTCGCCTCTATTTTGGGCCAGACAAGATGCCCTCGGGTGATTTACTGTATTCCACTCAACCACCACTACTTTTTGAGGATAATAATGGGGATGAGATTGAAGGTGGTGATACTTTCTCTAACCATTCCTACCTTTGGAGTTGGAACTTTTAA 720 0.4417 MSGADPTCYSIDSCSANNNNTSSKMYKGVRKRKWGKWVSEIRLPNSRERIWLGSYDTQEKAARAFDAALYCLRGKSASFNFPDTPLNLDINVPHQSLSPQEIQEVAAKFANNHPPLESAQEEPLLESQSGGDHSFGLFESNKSKSNPESSSLSIPMYDCDYGTMQVDHGDLEATDWTFFNMLDDLNGSDFRLYFGPDKMPSGDLLYSTQPPLLFEDNNGDEIEGGDTFSNHSYLWSWNF* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0253 239 SUPERFAMILY DNA-binding domain 25 83 IPR016177 GO:0003677
Apr9g0253 239 MobiDBLite consensus disorder prediction 118 151 - -
Apr9g0253 239 CDD AP2 26 84 IPR001471 GO:0003700|GO:0006355
Apr9g0253 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 239 - -
Apr9g0253 239 ProSiteProfiles AP2/ERF domain profile. 25 82 IPR001471 GO:0003700|GO:0006355
Apr9g0253 239 Pfam AP2 domain 26 74 IPR001471 GO:0003700|GO:0006355
Apr9g0253 239 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF018 14 239 - -
Apr9g0253 239 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Apr9g0253 239 PRINTS Ethylene responsive element binding protein signature 48 64 IPR001471 GO:0003700|GO:0006355
Apr9g0253 239 Gene3D AP2/ERF domain 24 83 IPR036955 GO:0003700|GO:0006355
Apr9g0253 239 SMART rav1_2 25 88 IPR001471 GO:0003700|GO:0006355
Apr9g0253 239 MobiDBLite consensus disorder prediction 122 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0253 Apr-Chr9 3295267 3295986 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0253 17 187 AP2-EREBP Transcription Factor Family AT1G74930 46.199 6.60e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr9g0253 AP2 6.4e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0253 - - gmx:112999363 256.529