Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0232 ATGGAACCAACATGCGTCCACACTGCACTCAATCTTAACGTTGATCCTTCTAATTACATGGTAGAGGAATTGGCTGATGAGCTGCGTCGCCTAAGTCGTGAGAATAAGAGGTTGACTGAGACGTTGACCCACATGTTTGAGAACTATCAGACTCTGCAAAAGCAATTGTGCCAATCGATCAACTCCAATTTTGAGCAAGACCCAACACAATCACGGAAGAGAAAAGCTGAGAGTGAAAATTGTACCAACAAATCTGGTATTAGATGCAACATTAACACTCAGTGCAGCACCATAACTGAGGAAGAGTCATTCAAAAGGTACAAAGATATCACCTCCTCGCCTAAGGTTACCAAGGTTCTTGTCAAAACAGAAGCATCCAATACAAGCTTATATGTGATGGACGGATATCAATGGAGGAAATATGGTCAGAAGGTCACCAGAGATAACCCCTCTCCTAGAGCTTACTTCAGGTGCTCCTTTGCCCCAAGCTGCCCCGTGAAAAAGAAGGTACAGAAGAGTTTAGAAGACCCCACTATATTGGTTACAACATACGAAGGAGAGCATAATCATGGTCATCAACGAGCTGAAGTATCACTTGTCTCGAGCCAAAGTGAAGCCCCTAGAGGGTCAGGTCCTGGTTTCTCACCTAGTACACCCATAATTGAAAGTTCTTGCCCCACCATAACGTTTGACTTGGTCAAGTCAAGATTGGTTGACGATGCCCAAAAGTCCTCTATCCATCAAATTTTGGTTCAACAAATGGCTAATTCTTTGACAAGAGATCCCAATTTCACCGCAGCACTTGCCACCGCCATTTCAGGAAAAATTGTGGACCAAAACCCTATGACCACACATCTTTAG 861 0.4379 MEPTCVHTALNLNVDPSNYMVEELADELRRLSRENKRLTETLTHMFENYQTLQKQLCQSINSNFEQDPTQSRKRKAESENCTNKSGIRCNINTQCSTITEEESFKRYKDITSSPKVTKVLVKTEASNTSLYVMDGYQWRKYGQKVTRDNPSPRAYFRCSFAPSCPVKKKVQKSLEDPTILVTTYEGEHNHGHQRAEVSLVSSQSEAPRGSGPGFSPSTPIIESSCPTITFDLVKSRLVDDAQKSSIHQILVQQMANSLTRDPNFTAALATAISGKIVDQNPMTTHL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0232 286 MobiDBLite consensus disorder prediction 186 220 - -
Apr9g0232 286 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0232 286 Gene3D WRKY domain 114 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g0232 286 Coils Coil 21 55 - -
Apr9g0232 286 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 280 - -
Apr9g0232 286 ProSiteProfiles WRKY domain profile. 134 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0232 286 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 280 IPR044810 GO:0003700
Apr9g0232 286 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0232 286 MobiDBLite consensus disorder prediction 195 220 - -
Apr9g0232 286 SUPERFAMILY WRKY DNA-binding domain 130 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0232 Apr-Chr9 3015435 3017120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0232 4 280 WRKY Transcription Factor Family AT1G80840 44.186 3.22e-71 220
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g0232 WRKY 1.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0232 - - gmx:100810978 379.407