Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0231 ATGGCATTGTTCCGCAAGTTCTTCTATAAGAAGCCCCCTGATGGGCTTCTAGAAATCACTGAAAGGGTTTATGTCTTTGATTACTGCTTTACCACGGATGTTATGGAAGAAGATGAATATAAAGTGTACATAGGGGGAATAATTGGGCAACTTCGTGATTACTTCCCTGATGCTTCATTTATGGTGTTCAACATGCGGGAGGGAGATAGCCAAAGCCAGATCTCAAACATTTTGTGTGACTATGATATGACTGTGATGGACTATCCCCGACAGTACGAAGGTTGTCCATTGCTTACCATGGAGATGATCCACCATTTCTTGAGGTCAGGTGAAAACTGGCTTCAACTTGGGCAACAAAATGTTGTCTTGATGCATTGTGAACGAGGTGGGTGGCCAGTTTTAGCATTTATGCTAGCTGCACTCTTGATTTATAGAAAGATGTTTACAGGGGAGCAGAAAACACTAGACATGATATACAAGCAAGCTCCTCGAGAACTTTTGCAGTTGATGTCACCATTGAATCCATTACCTTCACAATTGAGATATCTTCAGTACATATCAAGAAGAAATGTTGGTTCAGAATGGCCTCCTCTTGATAGAGCACTTACATTGGACTGTGTAATCATGAGACTTATTCCTAATATGGATGGAGAGGGTGGCTGCTGCCCTATATTTAGGATATATGGACAGGACCCTTTTATTCCTGCAGATCGGACTCCCAAAGTTCTCTTTTCAACTCCAAAAAAGAGCAAACTTGTCCGGCATTACAAGCAGGTTATACTTAAATCCTTTTACTCTAATTTAGTATGCTTTTTACAATTCAAGCATGATCATAATTCAAGAATAAAGATTTATTGTTTTCCCCATTTCCCTTTGTTTATTTATTTGTTTTTTGATTCATATTTGATACAGGCTGATTGTGAACTGGTTAAGATTGACATCCATTGTCATGTTCAAGGTGATGTTGTTTTTGAGTGTATTAGTCTGGACAGTGATTTGGAACGTGAACAAATGATGTTTCGGGTGATGTTTAATACAGCATTCATAAGATCAAATATTTTGATGCTTAACCGTGATGAAATTGACATATTATGGAATGCGAAAGATTACTTCCCCAAAAATTTTAGAGTGGAGGTTCTTTTCTCAGATATGGATGCTTCGTCTTCTGTTATTTCAATTGATCTGCCGCGTATTGAGGAGAAAGAAGGCCTACCTGTTGAAGCATTTGCTAAGGTCAAGGAAATTTTCAGCAATGTGGACTGGCTAGATTCAAAGACAGAGGTAGTGAATGTTCTCCAACAAATAACGGCATCAAATATCCTTCTGGAAAGATTGGACAGTGGTGGTTCTGCTGGAGCAAACAGCTTGCTAAAGGAGTCATTGTCTGGAAAATTTAAATTTGATTCTAAGGAACTAAACAATACAAAGAATCTGACTTCTGAAGTTCAGGGGAGACTTTCTACATCCTCGTTGGAATCGTCCGGGGATACTCCTGTGAAAAATAAGACAGAACCATTAGAATCAAAGGTACTGTCAGAAAACAATGTTAAGACTCTTGAATGTTTAGGTCAGGGGAACCAACCTATTCCCTCATATAGGCTCTCAACAGATTCAGATTCTACTAAAAGTGACACTGAACTGTTAGAATCAAAACAATCATTGAAAAATGATCCCAAGTTTACTACTTCTATGGCTCCGGGGACACAATCTATCCCCTTAATTGAACCATTTATGGGTCCAAATTCAATAAACAAGGAGAGTGGGTTATTAGAATCCAAGGAAATGGACATTGAATCGTTATCATCAAAGGCACTTTTGGAAAGTGGCACCATGCATCCTACTCCTGTACCTCAGGGGAAACAATCTATTTTCTCAATTGAACCAATCACTGATGCAGATTCATTGAAAAAGAAGACTGATTTGTTAGGATCAGAGGAAAAAGGGCTTAAATCATTAAAGTTGGAGGCATTGTTGGAAAATGATAGAAGATTCAAATTTGAGCCAAAGCCACTGCCAGAATTTGATTCCAAATGTCCTACTTCTGATGTTGAAGGGAAACTTTTGATGTCCTCATTTGAACCATCTGACGATGCTCCTATGGAAAAGAAAAAAGAACCTTTAAAGGCACCACCTGAAAATAGTATCAAGACTCTTGCTTCCACTGATTCAAGTTCTCCTAAAGTGAAGATTGAATCATTAGAATCAGAGGCATTGGTAAAAAATGATACCAAGTTTCCTACATCTATGACTCATGGGGAGCAACCTATTCCCTTAATCGAACCATCTGTGGATGCAAATTCAATGAAACAGAAGATGGGACCATTAGAGTCAAAGGAAAAGGATACTGAATCATTAGAATCAAAGTCATTGTTGGAAAATGATGCCAACTGTCCTCCATCTTTGGCTCATGGGAAACAATCTATTCCGTTAATTCAACCATCCATAGACGCAAATTCAATGAAAAAGAAGATTGGACAACTAGAACAAACGGTGTTTTCAGAAAATGATATCAAGAGACTCACATCCACAATTCAAAGGAAACAAAACAGTCCCTTACTTGAATCACCCGCTGATGCAAACTCAATTAAAAGGAAGATTAAACCTCAAGAATTGCAGGTTGCTCTTCATCTTCCCACTCAATCTAAAATAATTTCACCACAGGTCCGTCCAGCTGTTCGATCTGCTTCAACTTCTAGATCTAACTCCTTGCAAGGTTCACCAGTAGCTATCTCAAGATATCATAGTGCACCATCAGCTCTTGGAATAACAACTGTGTTGCAGGATCATGCACCGATATCTCCTCCTTCTACTTTGTCTCCTTCAGTCTCCAAGTTGCCAAAATCAGTAGAGCCTAGTCCTGCAAGTGTTCCCCCAGCATCCTCACAACCATTGCTTTCATCTTTACCATCAAAATCTTCCATGGATGCTATTGCTTCTACTGAAAAGACTTCTGGACCCATTGCTCCTCCTCCTCCACCTCCACCTCCACCTCCACCTCCACCACTTCCACCCCCTCAACATGAACATACTTCAAAATTGATGCAATCTGTCGTCACACACCACCCTGAAAATGCAATGAATGATAAAGGTCAAAAATCAATAGTTAGTCTTCCTCCTCCTCCTCCTATGCCACCTCCATTTCCTCAACATGAACCCACTTCAAAATTGATGCAATCCATTGTCACATATCACCCTGAAAATACAATGCATGATTTAGATAAGAAATCATTGGTTAGCCCTCCTCCTCCTCCTCCTCCACCTCCACCTCCACCTCCAACTCTTTCTTCTCCATCCTTTGCCATGGAGAGCTCATCTTTATCCCATCCTCTACCCTCCTCCCTTCCAGTGACATCGGATTTCAAAGATTCATTTAAAGGTCCTTCTTCCTTTCCTTCGCCTCCACCTCCCCCTCCGCCGCCGCCATCTTCAACTGAACAGGCTTCATCATCTTCAATACCTCCTCCTCCTCCGCTGTCTGGGCTTCCTTCTTCAGCTTCCCACACTCTTTCTTCTCCATCAAGTATAAACAAGTCTGGCACGCCTGGCCCTCCTCCCCCGCCTCCACCTCCTAGTCTTTCTAGCACCACACCTGGTTCTATTCCAACACCATCAGTACCACCACCTCCTCCTCCTCCAGCTTCTGCATCCAACAATTCTTCATCTAACCAGTCCACAAATGTTCCACCTGTACCCCCACCACCTTCCCCTGCTGCCACCGGGTTATCAAAACCTGGCACTGCTGCACCTCCAGTTCCTGGACCACCTTCTGCTCCATTAGGTGCAAAGGGACGTGGCCTGTTGCGTGCTAATCCCAAAGGTCAGTCTCAGACTAAAAGGAGCAATCTGAAACCTTATCATTGGTTAAAATTAACAAGGGCCATGCAAGGAAGCTTATGGGCTGAGACACAGAAACTTGATGAGTTTTGTAGGGCTCCAGAGTTTGACATGTCAGAACTTGAGAGCCTGTTCTCTGCAGTTGCTCCAAATTCTGATGACGGAAAAGGAGGAAAATTAAATCGCCGTGCCTCGGGGCAAAAAGTTGACAAAGTTCAATTGATTGAGCTCAGGCGGGCATATAACTGTGAGATCATGCTTACGAAAGTCAAAATCCCTTTGCCTGACTTGATGAGTGCTGTGCTTGCATTGGACGATTCAGTATTAGATGTTGATCAAGTTGAGAACCTCATAAAGTTCTGTCCAACCAAAGAAGAGATGGAATTGCTCAGGGGCTATACTGGAGATAAGGACAATTTGGGAAAGTGTGAACAGTTCTTCTTAGAATTAATGAAAGTGCCAAGAGTGGAAAACAAGCTAAGAGTTTTCTCTTTCAAGATGCAATTCCGCTCCCAGGTTTCAGAGCTTAGAAGGGACTTGAATATTGTAAATTCTGCATCTGAAGAGATAAGGAATTCAGTCAAGTTGAAAAGAATCATGCAGACCATTCTTTCTCTAGGAAATGCTTTGAACCATGGAACTGCAAGAGGTTCTGCTGTTGGGTTCCGATTAGATAGTCTCCTTAAACTCACGGATACACGAGCCAGAAACAACAAGATGACTCTCATGCATTACCTTTGTAAGGTGCTTGCTGAAAAGCTTCCAGAACTATTAGATTTCCCTAAAGACCTAGTAAGTTTGGAGGCATCAACCAAGATACAACTGAAATATTTGGCAGAGGAAATGCAAGCTATTAGTAAAGGACTGGAGAAAGTAGTTCAAGAATTGACTGCATCAGAGAATGATGGGCCTGTGTCAGAAAGCTTCTGCCAGATTCTGAAGGAATTTCTTTCTGATGCTGAGGCTGAAGTTAGATCTTTGGCTCAACTTTATGCCAATGTGGGTAGAAATGCAGATGCATTGGCTTTATACTTTGGAGAAGATCCGGCACGCTGCCCATTTGAACAAGTTGTATCTACTCTCCTCAACTTTGTGAGAATGTTCGTTCGAGCACATGAAGAAAATTGCAAGCAGCTTGAATTAGAGAAAAAGAGAGCAGAGAAGGAAGCAGAAAATGAGATGTTGAAACTGGCTGCTAAAAAAGAGCCTGAAAATATGATAAGAACCACCATCAAGAGTGGGAATATTAAGTGA 5088 0.4145 MALFRKFFYKKPPDGLLEITERVYVFDYCFTTDVMEEDEYKVYIGGIIGQLRDYFPDASFMVFNMREGDSQSQISNILCDYDMTVMDYPRQYEGCPLLTMEMIHHFLRSGENWLQLGQQNVVLMHCERGGWPVLAFMLAALLIYRKMFTGEQKTLDMIYKQAPRELLQLMSPLNPLPSQLRYLQYISRRNVGSEWPPLDRALTLDCVIMRLIPNMDGEGGCCPIFRIYGQDPFIPADRTPKVLFSTPKKSKLVRHYKQVILKSFYSNLVCFLQFKHDHNSRIKIYCFPHFPLFIYLFFDSYLIQADCELVKIDIHCHVQGDVVFECISLDSDLEREQMMFRVMFNTAFIRSNILMLNRDEIDILWNAKDYFPKNFRVEVLFSDMDASSSVISIDLPRIEEKEGLPVEAFAKVKEIFSNVDWLDSKTEVVNVLQQITASNILLERLDSGGSAGANSLLKESLSGKFKFDSKELNNTKNLTSEVQGRLSTSSLESSGDTPVKNKTEPLESKVLSENNVKTLECLGQGNQPIPSYRLSTDSDSTKSDTELLESKQSLKNDPKFTTSMAPGTQSIPLIEPFMGPNSINKESGLLESKEMDIESLSSKALLESGTMHPTPVPQGKQSIFSIEPITDADSLKKKTDLLGSEEKGLKSLKLEALLENDRRFKFEPKPLPEFDSKCPTSDVEGKLLMSSFEPSDDAPMEKKKEPLKAPPENSIKTLASTDSSSPKVKIESLESEALVKNDTKFPTSMTHGEQPIPLIEPSVDANSMKQKMGPLESKEKDTESLESKSLLENDANCPPSLAHGKQSIPLIQPSIDANSMKKKIGQLEQTVFSENDIKRLTSTIQRKQNSPLLESPADANSIKRKIKPQELQVALHLPTQSKIISPQVRPAVRSASTSRSNSLQGSPVAISRYHSAPSALGITTVLQDHAPISPPSTLSPSVSKLPKSVEPSPASVPPASSQPLLSSLPSKSSMDAIASTEKTSGPIAPPPPPPPPPPPPPLPPPQHEHTSKLMQSVVTHHPENAMNDKGQKSIVSLPPPPPMPPPFPQHEPTSKLMQSIVTYHPENTMHDLDKKSLVSPPPPPPPPPPPPPTLSSPSFAMESSSLSHPLPSSLPVTSDFKDSFKGPSSFPSPPPPPPPPPSSTEQASSSSIPPPPPLSGLPSSASHTLSSPSSINKSGTPGPPPPPPPPSLSSTTPGSIPTPSVPPPPPPPASASNNSSSNQSTNVPPVPPPPSPAATGLSKPGTAAPPVPGPPSAPLGAKGRGLLRANPKGQSQTKRSNLKPYHWLKLTRAMQGSLWAETQKLDEFCRAPEFDMSELESLFSAVAPNSDDGKGGKLNRRASGQKVDKVQLIELRRAYNCEIMLTKVKIPLPDLMSAVLALDDSVLDVDQVENLIKFCPTKEEMELLRGYTGDKDNLGKCEQFFLELMKVPRVENKLRVFSFKMQFRSQVSELRRDLNIVNSASEEIRNSVKLKRIMQTILSLGNALNHGTARGSAVGFRLDSLLKLTDTRARNNKMTLMHYLCKVLAEKLPELLDFPKDLVSLEASTKIQLKYLAEEMQAISKGLEKVVQELTASENDGPVSESFCQILKEFLSDAEAEVRSLAQLYANVGRNADALALYFGEDPARCPFEQVVSTLLNFVRMFVRAHEENCKQLELEKKRAEKEAENEMLKLAAKKEPENMIRTTIKSGNIK* 1696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0231 1695 MobiDBLite consensus disorder prediction 1097 1125 - -
Apr9g0231 1695 Pfam C2 domain of PTEN tumour-suppressor protein 200 382 IPR014020 -
Apr9g0231 1695 Pfam Formin Homology 2 Domain 1274 1646 IPR015425 -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 886 906 - -
Apr9g0231 1695 Gene3D - 206 277 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 476 501 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 508 538 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 931 1282 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 1178 1215 - -
Apr9g0231 1695 SMART PTEN_C2_2 197 383 IPR014020 -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 1035 1051 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 668 813 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 714 730 - -
Apr9g0231 1695 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1272 1672 IPR015425 -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 539 553 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 696 710 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 931 948 - -
Apr9g0231 1695 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 305 384 IPR035892 -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 554 569 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 773 788 - -
Apr9g0231 1695 Gene3D Formin, FH2 domain 1291 1684 IPR042201 -
Apr9g0231 1695 ProSiteProfiles C2 tensin-type domain profile. 199 384 IPR014020 -
Apr9g0231 1695 Coils Coil 1647 1679 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 1162 1177 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 959 980 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 985 1007 - -
Apr9g0231 1695 Gene3D - 299 387 - -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 1128 1161 - -
Apr9g0231 1695 Gene3D Protein tyrosine phosphatase superfamily 15 205 IPR029021 -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 1077 1096 - -
Apr9g0231 1695 PANTHER FORMIN-J 1 1155 - -
Apr9g0231 1695 PANTHER FORMIN-J 1167 1688 - -
Apr9g0231 1695 SMART it6_source 992 1691 IPR015425 -
Apr9g0231 1695 MobiDBLite consensus disorder prediction 476 579 - -
Apr9g0231 1695 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 12 187 IPR029021 -
Apr9g0231 1695 SUPERFAMILY Formin homology 2 domain (FH2 domain) 1285 1666 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0231 Apr-Chr9 2993305 3007759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0231 762 930 FH2 protein (formin) Gene Family AT2G25050 30.108 1.00e-09 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0231 - - aprc:113848213 2974.11