Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0223 ATGGGAACAAATCTCAGCACTCCCAAAACTGGAAAGTTTTCTGAAGATGCTGAAAATGACCATCTTAGATATGGCTTATCATCTATGCAAGGTTGGCGTTTGACAATGGAAGATGCACATGCTGCACATCTTGATCTGGATGCATCAACTTCCTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAGCAGGTGCTCAAGAGTGAAGCATATGTAGCTGGAGATGTAGGAACCTCTCTTCAGCAAGCATTTTTCAGAATGGATGACATGATGCGTGGTCAAAGGGGATGGAGGGAATTAGCAGTTTTGGGTGATAAGGTAAAAAAGTTTAATGGGATAGTAGAAGGGTTGATTTGGTCTCCACGAAGCAGTGATGGTAAGGACCAAGGTGATGGTTGGCCCTTTGAGGAGGGTCCTCATTCTAATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAATTATTAGAAACAATCAACTTTTTGTTGCAAATGCTGGTGACTCCCGCTGTGTAATATCTAGGAAGGGTCAGGCATATGATTTGTCTAGAGACCATAAACCTGATCTTGAAATTGAGAAGGAAAGAATCGTAAAAGCTGGTGGTTTTATTCATGCAGGACGAGTTAATGGGAGTTTAAACCTTGCAAGAGCTATAGGTGACATGGAATTTAAGCAGAATAAATTTCTTTCCGCTGAGAAACAAATTGTGACAGCCAATCCAGACATAAACATCGTTGACCTTTGTGATGAAGATGAATTTATAGTGCTAGCTTGTGATGGCATATGGGATTGCCTGTCAAGCCAACAATTGGTAGATTTTGTGCGTCAACAACTACTCTTGGAAACGAAACTTTCTGCAGTTTGTGAAAGAGTACTTGATCGATGTTTGGCACCAACAATTGCTGTTGGTGATGGATGTGATAACATGACCATGATCTTGGTGCAGTTCAAAAAACTGATCCAATCCAGTGCACCTTCACAAGAGCATTCCTCTTCAAATGAACAAGCTGCATCTGAACAAAGACTAGAGAGAAGTGAAAGTTAG 1083 0.4146 MGTNLSTPKTGKFSEDAENDHLRYGLSSMQGWRLTMEDAHAAHLDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSEAYVAGDVGTSLQQAFFRMDDMMRGQRGWRELAVLGDKVKKFNGIVEGLIWSPRSSDGKDQGDGWPFEEGPHSNFAGPTSGSTACVAIIRNNQLFVANAGDSRCVISRKGQAYDLSRDHKPDLEIEKERIVKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLSAEKQIVTANPDINIVDLCDEDEFIVLACDGIWDCLSSQQLVDFVRQQLLLETKLSAVCERVLDRCLAPTIAVGDGCDNMTMILVQFKKLIQSSAPSQEHSSSNEQAASEQRLERSES* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0223 360 PANTHER PROTEIN PHOSPHATASE 2C 60 ISOFORM X1-RELATED 1 341 - -
Apr9g0223 360 Pfam Protein phosphatase 2C 157 311 IPR001932 -
Apr9g0223 360 Pfam Protein phosphatase 2C 23 103 IPR001932 -
Apr9g0223 360 MobiDBLite consensus disorder prediction 336 360 - -
Apr9g0223 360 CDD PP2Cc 23 329 IPR001932 -
Apr9g0223 360 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Apr9g0223 360 PANTHER PROTEIN PHOSPHATASE 2C 1 341 IPR015655 GO:0004722|GO:0006470
Apr9g0223 360 Gene3D - 1 330 IPR036457 -
Apr9g0223 360 SUPERFAMILY PP2C-like 4 330 IPR036457 -
Apr9g0223 360 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Apr9g0223 360 SMART PP2C_4 12 327 IPR001932 -
Apr9g0223 360 MobiDBLite consensus disorder prediction 336 351 - -
Apr9g0223 360 SMART PP2C_SIG_2 28 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0223 Apr-Chr9 2900095 2908072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0223 1 331 PP2C-type Phosphatase Gene Family AT2G25070 77.644 0.0 564
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0223 K17499 - gmx:100793667 615.535