Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0211 ATGAAAAGAAAGGGAGACTCTAATAGTTGCACGTTAACACCCTTTTGCAAGAAAATGATGGTGGATGACGATCATACAATGGACGACCTCAATGACCAGTTTCCTGTGGGAATGCGTGTTCTTGCTGTTGATGATAATTCAACATGTCTCAAGGTTTTGGAGTCTCTGCTCCGAAGGTGTCAATACAATGTAACCGTAACTTTAAATGCAATAACGGCACTGGAATTGTTGAGAGAAAACAAAGACAAGTTTGACCTGGTTATCAGTGATGTCCACATGCCAGACATGGATGGATTTAAGCTGCTTGAGCTCGTGGGGCTTGAGATGGACCTACCTGTCATAATGTTGTCTGAGAATGATGATCCAAAGATGGTGATGAAGGGAATTACTCATGGAGCTTGTGATTATCTGCTGAAACCTGTTAGAATTGAGGAGCTACAGAACATTTGGCAACATGTAATCAGGAGGAAGAAGATTGTCTCAAAGGAGTTGAATAATATTATCAACCAAGACAGACCCAATTCTGATAGCTGCAATGAAAGAGGGTCAGCAGCAACAGGAAATTCTGATCAAAAGGGAAACCCTTCCAAGAAAAGGAAGGATCAGGATGAAGATGATGATGAGGATGATGAAAGTGATCATGACAATGAGGAATCATCAACCCAAAAGAAGCCTCGTGTTGTTTGGTCCGTGGAGCTGCACCGCAAGTTTGTTGCTGCTGTTAATCAATTAGGCGTTGACAAGGCTGTACCTAAAAAGATTCTCGATTTGATGAATGTTGAAAAGCTTACAAGAGAGAATGTGGCAAGCCACCTCCAGAAATATAGACTTTACCTGAAAAGAATTAGCTGCGTGGCAAACCAACAGGCTAATATGGTTGCAGCCTTAGGTAGTGCAGATACATCCTATTTGAGAATGGGTTCTTTGAGTGGTGTTGGACATTTGCAGACATTGAGTGGCCCACAACAGTTTTATAACAATGCTTTCAGGCCCTTTTCACCTGTTGGGATGATTGGTAGAATGAACACTTCCGTTGGTCTGAATGTGAATGGGTTGCCTACTTCAGAAACTCTTCAGTTGGGGCATGCACAAAGTTTAAACAACTCCATAAATGATCCACTTAATTTCCATCCTATTCAGGCAATGCCAATGTCTGTAGGGATTGATCCAATGCGACACAATAAGGATGTTAGTCTTAGTCCTATTCAAAACTTGATCCCACTTATTGATGCTAACCCAACTTTTGCCATCACAAATAAACTTCCAGATCAAATATCAAAAGTAACAACGGGTTGCTCACTTTCTCCAATTTTGGATATCTCAAACAATGGCATGATGTTGAAAGCAAATCCTCAAAACACACTAGGGAATGGAATATATTCAGTAGCCTCTCAACATTTTTCTCTCCCTTTGCTGGATAATGGCAGGTGTAGTGATATTTGGTCAAGTTCTATGCAGTCATCTGGGACAAATTTTTACCCTCCAAGGGAACATTTTAGACAGGCTTCTATGTCTTCTATAGATAACATGTCTTCTACAACCTTGCATGGAGGGAATCTGAGTGCTACTTCATCCATTACTTCAATGTCGAGTCAATCTTATGATTCACTCCCTGCTATGCACTCCCAAGGAGTCCTTTTTACAAGTAGTCCAGGACAAATAAGCAATAATGTGCCATTTCAAGGGTGGAATGATCATAATCAAGATAGTAGTTATCATTCACATGCTATTGGTAATTCAGTAGACTCTATGATTTCAGTGAATGGTAATGTTGGTCCAGAAGGCCATACTTCTACAAACTCAACCTTCAATGGAAACTTGGACTTCAATTTTTGTGGTCCCTTACAAGTGAAGCATAGCGGAGTTATGGAATTGACTGAAGAAGCCTCATTGAAACCACATCAGGGGTGCATCATGAACCAGCAGAAGTCCCAAAACATTCCTACCACTTGTAATCTCGGTTCACTGGAAGACTTGGCCAGTGCAATGATGAAACAGAAACAAGACAAGGTGGAATTATTGGATGGGTACAATAATTATTCTGCCGGGATATCTATGTGA 2061 0.4081 MKRKGDSNSCTLTPFCKKMMVDDDHTMDDLNDQFPVGMRVLAVDDNSTCLKVLESLLRRCQYNVTVTLNAITALELLRENKDKFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSENDDPKMVMKGITHGACDYLLKPVRIEELQNIWQHVIRRKKIVSKELNNIINQDRPNSDSCNERGSAATGNSDQKGNPSKKRKDQDEDDDEDDESDHDNEESSTQKKPRVVWSVELHRKFVAAVNQLGVDKAVPKKILDLMNVEKLTRENVASHLQKYRLYLKRISCVANQQANMVAALGSADTSYLRMGSLSGVGHLQTLSGPQQFYNNAFRPFSPVGMIGRMNTSVGLNVNGLPTSETLQLGHAQSLNNSINDPLNFHPIQAMPMSVGIDPMRHNKDVSLSPIQNLIPLIDANPTFAITNKLPDQISKVTTGCSLSPILDISNNGMMLKANPQNTLGNGIYSVASQHFSLPLLDNGRCSDIWSSSMQSSGTNFYPPREHFRQASMSSIDNMSSTTLHGGNLSATSSITSMSSQSYDSLPAMHSQGVLFTSSPGQISNNVPFQGWNDHNQDSSYHSHAIGNSVDSMISVNGNVGPEGHTSTNSTFNGNLDFNFCGPLQVKHSGVMELTEEASLKPHQGCIMNQQKSQNIPTTCNLGSLEDLASAMMKQKQDKVELLDGYNNYSAGISM* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0211 686 Gene3D - 37 171 - -
Apr9g0211 686 PIRSF RR_ARR_type-B 18 685 IPR017053 GO:0003677|GO:0003700|GO:0009736
Apr9g0211 686 Gene3D - 220 283 - -
Apr9g0211 686 SUPERFAMILY CheY-like 37 162 IPR011006 -
Apr9g0211 686 SMART REC_2 38 150 IPR001789 GO:0000160
Apr9g0211 686 CDD REC_typeB_ARR-like 40 154 - -
Apr9g0211 686 ProSiteProfiles Response regulatory domain profile. 39 154 IPR001789 GO:0000160
Apr9g0211 686 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 224 277 IPR006447 GO:0003677
Apr9g0211 686 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR10 28 664 - -
Apr9g0211 686 MobiDBLite consensus disorder prediction 169 224 - -
Apr9g0211 686 MobiDBLite consensus disorder prediction 169 192 - -
Apr9g0211 686 PANTHER TWO-COMPONENT RESPONSE REGULATOR 28 664 IPR045279 GO:0009736
Apr9g0211 686 Pfam Response regulator receiver domain 40 148 IPR001789 GO:0000160
Apr9g0211 686 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 221 280 IPR017930 -
Apr9g0211 686 Pfam Myb-like DNA-binding domain 226 276 IPR001005 -
Apr9g0211 686 SUPERFAMILY Homeodomain-like 221 281 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0211 Apr-Chr9 2747894 2753233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0211 32 682 Response Regulator Gene Family AT2G25180 42.051 8.12e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Apr9g0211 Response_reg 1.4e-22 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0211 - K14491 gmx:100777171 941.414