Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0205 ATGGCCAGACCACAGCAACGATTTCGAGGTGTCCGACAAAGGCATTGGGGCTCTTGGGTCTCTGAAATTCGCCACCCCATATTGAAGACAAGGATATGGCTTGGTACTTTTGAAACAGCTGAGGATGCTGCTAGAGCCTATGATGAAGCAGCTAGGCTAATGTGTGGTGCCAGGGCAAGGACAAACTTTCCATTCAACCCAAATATGTCTCATTCTTCTAATTCAAAGCTTCTCTCAGCAACTTTGACTGCTAAACTTCACAGGTGCTACATGGCTTCTTTGCAAATGACCAGGCAATCTTTAGCAACAGAGGCTCAGAGAACAAATTCAATACCAAATTCCTTCTCCACAACCACAACAAACAACTTTAGTGTGAAAAGTAAGAGACCCCCAGAGCAGGATCAAGAATCAGAGGGAAATAACAGGGTTGTTAAAAATGTTAAAGCTGTGGAAAATGGTCCTCCACAATTCAAGCCTTTAGAAGATGATCATATAGAGCAAATGATTGAGGAGCTTCTTGATTATGGGTCTATTGAGCTTTGCTCTGTCATTCCTTCCTAG 561 0.4314 MARPQQRFRGVRQRHWGSWVSEIRHPILKTRIWLGTFETAEDAARAYDEAARLMCGARARTNFPFNPNMSHSSNSKLLSATLTAKLHRCYMASLQMTRQSLATEAQRTNSIPNSFSTTTTNNFSVKSKRPPEQDQESEGNNRVVKNVKAVENGPPQFKPLEDDHIEQMIEELLDYGSIELCSVIPS* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0205 186 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Apr9g0205 186 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
Apr9g0205 186 MobiDBLite consensus disorder prediction 101 141 - -
Apr9g0205 186 MobiDBLite consensus disorder prediction 101 128 - -
Apr9g0205 186 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Apr9g0205 186 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Apr9g0205 186 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Apr9g0205 186 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Apr9g0205 186 CDD AP2 6 64 IPR001471 GO:0003700|GO:0006355
Apr9g0205 186 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Apr9g0205 186 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 1 182 - -
Apr9g0205 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF003-LIKE 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0205 Apr-Chr9 2647517 2648346 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0205 1 186 AP2-EREBP Transcription Factor Family AT5G25190 65.426 3.53e-78 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Apr9g0205 AP2 1.4e-11 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0205 - - gmx:100785918 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0205 9 2647517 2648346 Apr5g1296 5 17257909 17258763 PCT