Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0203 ATGAAAACGAAGCTTCTTCTTCTTATGTTTCTCATGTTCCTCCTTATTCTTCACGAACCCATTTACATTCTTGCCTCAACAACATACCCTCTTGTTCCCTCACCTGAAGTTCCACCCTTTTCTCCATTTTCCGCCTCAACTTCTGCTTCTTCTCCAGGTGTTGTGATGGGAGCTGAACAGCAACAAATTGATTCACACAAGAAAATGGTAATAGCTATTGCTGTTGCCAGCACTTCACTTGGTGCAGTCATTTTGTGTGTTTTATGCATCTGGATTTACTACACCAAGTATCCTTCAAAACCCAACAGGAAAAATGTTAAAAGTTCAGATGCTGAGAAAGGGCTAGCTTCAGCTCCATTTTTGAGTAAATTCAGCTCTGTCAAGATGGTTGGTAAGAAAGGGTGTGTTCCAATAATTGATTATAAGCAAATAGAAAAAGCCACCAGCAATTTCAAGGAAAGTAACATTTTGGGTGAGGGTGGTTTTGGACGCGTTTACAAGGCTCATTTGGATGATAACTTGGATGTTGCCGTCAAGAAACTGCACTGTGAAAGTCAGCATGCTGAGCAGGAATTTGAGAACGAGGTGGATTTGTTAAGTAAAATTCTACATCCAAATGTAATTTCTCTTCTGGGTTGTAGCAGTAATGACGATACGAGGATTATTGTCTATGAATTGATGCAAAATGGATCATTGGAAACTCATTTACACGGACCTTCTCATGGCTCGGCCTTGACTTGGCATTTGAGGATGAAGATAGCCCTTGACACAGCAAGGGGATTAAAATATCTGCATGAGCACTGTAACCCTCCGGTGATCCATAGAGATCTGAAATCTTCTAATATTCTTTTAGATACAAAGTTCAATGCCAAGCTTTCTGATTTTGGTCTTGCCATAACTAATGGGTCCCAAAATAAGAATAACATCAAGCTTTCAGGCACATTGGGTTATGTAGCCCCAGAGTATCTTTTAGATGGTAAATTGACCGATAAAAGCGATGTCTATGCTTTTGGAGTGGTGCTTCTGGAGCTTCTATTAGGAAGGAAGCCTGTGGAAAAACTAGCACCAGCTCAATGCCAATCTATTGTCACATGGGCCATGCCACAGCTCACCGACAGATCCAAGCTTCCAAACATCGTGGATCCTGTAATTAAGAATACCATGGACCCCAAGCACTTGTACCAGGTTGCTGCTGTGGCTGTGCTGTGTGTGCAACCTGAGCCGAGCTACCGTCCTTTGATTGCAGATGTTCTTCACTCGCTCATCCCTCTTGTACCTGTGGAGCTTGGAGGAACACTGAGAGTTCCACAAATGGCCCAGCAAGTTTTACCAGCTGATCCACATGTGGATTCTAATCAATGA 1362 0.4244 MKTKLLLLMFLMFLLILHEPIYILASTTYPLVPSPEVPPFSPFSASTSASSPGVVMGAEQQQIDSHKKMVIAIAVASTSLGAVILCVLCIWIYYTKYPSKPNRKNVKSSDAEKGLASAPFLSKFSSVKMVGKKGCVPIIDYKQIEKATSNFKESNILGEGGFGRVYKAHLDDNLDVAVKKLHCESQHAEQEFENEVDLLSKILHPNVISLLGCSSNDDTRIIVYELMQNGSLETHLHGPSHGSALTWHLRMKIALDTARGLKYLHEHCNPPVIHRDLKSSNILLDTKFNAKLSDFGLAITNGSQNKNNIKLSGTLGYVAPEYLLDGKLTDKSDVYAFGVVLLELLLGRKPVEKLAPAQCQSIVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLIADVLHSLIPLVPVELGGTLRVPQMAQQVLPADPHVDSNQ* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0203 453 ProSitePatterns Protein kinases ATP-binding region signature. 157 180 IPR017441 GO:0005524
Apr9g0203 453 SMART serkin_6 151 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0203 453 PANTHER BNAA04G14780D PROTEIN 38 442 - -
Apr9g0203 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 272 284 IPR008271 GO:0004672|GO:0006468
Apr9g0203 453 CDD STKc_IRAK 157 424 - -
Apr9g0203 453 SUPERFAMILY Protein kinase-like (PK-like) 132 421 IPR011009 -
Apr9g0203 453 Gene3D Transferase(Phosphotransferase) domain 1 227 426 - -
Apr9g0203 453 Gene3D Phosphorylase Kinase; domain 1 116 226 - -
Apr9g0203 453 ProSiteProfiles Protein kinase domain profile. 151 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0203 453 PANTHER OS01G0750732 PROTEIN 38 442 - -
Apr9g0203 453 Pfam Protein kinase domain 152 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0203 Apr-Chr9 2611535 2616353 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0203 25 367 Receptor kinase-like Gene Family AT1G80640 48.997 1.22e-99 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Apr9g0203 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0203 - - gmx:100785380 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0203 9 2611535 2616353 Apr5g1294 5 17244855 17248494 PCT