Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0197 ATGGTTGAGGAACAGCCCCAGCTTAAACCCAAGAACTATATGTCTGCAATCAGTAGTGCTTCAGATGCTCCTAAAGCTAGATCAGAAACCAACAGTATGGCCAAGGGTTTACCGTTTTCACAATTTGATAATCAACCCAAGGAAAAGATAAAAGCTAGTGAAAATATGATGAAAGTTGGCGTGCCTATCATGCCAAAGAATCTGCCATCTGATTTTAGTACCATGCAGTTTGGTTTTACTAATGCTCCCTGTAGTAGTAATGATCATACTGGAAGACAATCAAATAATTCTTTCCCAGGGATGAATAAATATTTGGATAGTGATAAAGGGGTGAGATTTGCTGAAGACACTTTTGCCAAAATAAATTCTGGATTTGGAATTTGTCGGTTAGTGGAATATCCAAACTGCATGACAAGAGCTGTTGGTGGTAGTAATAACTGTATTTCAGCTGTTAATACAAAGATATACGAATCAAATTATGAATCAAGCTTGCCTTCAGAAGCATCTGTGGCTGCAAATTTTTTGCATGGTACAAGCAATGTATCAGCTCTTGGACAAGATAATCACATGACTCCAGAGACAGCCATTCCATTTGGAGGAATTTTCAAGGGCCTTCCCTCTCTGGTTTCAAGCTCTTCATCAAATCATCTTCCTACTTTGCTGCAGCAGCAGGATAATAATATGGATGCATATTTCCTTGATGAAAACATGAGGTTGCTTGCATTGACACAGATACTGGAATTATCTAAGCAACAAAATACTCTGTATTTTCATGATATGAATCAAAAGCAAGGGAGATCCTGCAATTTTTCAAAAGTTCAGCATTATATGTGTGAGTCGTCAACATCTAAACAAGGTACTATTGGGGCATCACTGAAGTTGCACCAAAATAGAGGGACTAGTGGGAATGCTGAGAGTACAGATAGTTTTGAGAATCTGGCTTCCTTCACAGGTTTGAACAGATATTGTCGCTTGTCTGGCTTGGCACCAATACCTTTACATTCTAAAGAGAAGGAATCACAATGTACACATCCCTATAATCTTCGAAATGAAGAGCCATCTTTGAGCCTTGGAAAAAACAAAGAGAATGCCAGATCTAGTGCGTGTGAAAAATGCTCTGAGCAACCATCAGATAATCATTTGGGTGGCAAGTACACAGGTGCGGCTCAGGTAAACTATTGCAGAGGCAATTTTTTCTCGGGAATTGAATCCTTCAGTAGAGATTTGAATACTTCAAAGGATCACTTTGAGCAAAGTGGGAAGTTAGATGGCCAAGACTCAAGCAAAATTGGCTCTCATACGCCTCAATGGGGAGATGTGCCAGGTGAGGTCAGGAAAACAGTTTGTGATGCAACGTCTTTAGATCAGATGGCTACTGGTTTGGATTGGGAAGGACAAGACAGTGTTCAACTTGGAAACATTTCTGTGAAACGCTTGAAAAGAACTATTGATATGGAGGATGCATGGAAAGCTCAAGAAAATTCTAATGTCTCTTCTGGATCTTCTGCTCGAGTTGTTAGTCAGGCATCTGTGGAGGTCAATAATGTTGATTCTTGTACCGTTGATCCTGTAGACACTGGTTTTGTCAACAACCTTTTAGTTGATGAAGGGTCAGGAATTGATCAAGGTAGGTCCTCAGATGTAGTTGAAAGTGAACAAAGTGATGAATTTCTTGGCTCAACTTGTGGGAATTACTTGAAAAATGGTTATATGAGAATCTTAAATGATCAACCATGTCGCAGTCTCCTTGATGAGCTTAAACTGTTAGATTCTTTGATATGGAAGAAAGGCCAGGATCAAAACCATTTTTCTGCTAATTGTAAAACCCATCAATCTCAGAGAGTCAAGAAGGGCCTCAAAGGAAAAAAACGAAAGAGAAATGAATTGAGGATTGTAGATGCTTCATTTTCATCCAGAATTTCTTCCTTATTGCATAAAAAGGGTGGTGAAGGTGCTGGAATTTTTAATTCATCTTCCAGTTTAGCAAAAGAAATGCAGATGCGCTGTTTATCTAGCCTGAAAAGATCATCTAACAAGTCTTCCTATGTTGAAACTGGTAACAAACAAAGACAAATTGCATTTTCATCCAAATCTCTCTCTGGTGAGAATCATCTGAACAGGCATGGCAGTGCAAAAGTTAGCTATGAGTCAGAACTAAATTCTGATGCTGAGTTTCACACATGTCCTGAAGTTTCTGGAACAAAGAAATTAAGAAAGGATTTCAGTTCTGGTTGTTTTGAGCAATGTCAAATGCAAAAACCAGCCCATGAGGAACTGGAACCTGAAAATGCTAAGCTGAGGTCATTCTCTTGCAGTAAGGAAAATGCTCCTAGAATCACTAGGCCAATAGTGTGTGGAAAATATGGTGAAATATCTAGCGGACAATTGGCTACAGAGGTACCGAAACCAGCAAAAATTGTCTCTCTCAGCATGGTTCTTGAAACCTCCAAAAGATGTATGGTCCCTACAAATGACATTGCTAGACTAACTTCGAAAAAGAAATGGAAGACATTAAGCATTGGAGCAAGTATTGGGCAATGCTGTGGGAACCCTGGTTTGAAAACTACGGAACATAAAGAAACCCAAAATACAATAATTTGTGATGGAGCAGATGTTGATCTCCCTATGGAGGATTTGGAGAGGGGTGGCAAGCCACCTGTTATTTACACAGGGAAGAAAGCTACCAAAGCTAAGCAGGGGGATATTATTGTAAATAGAGCTGATGCTCCATCGAAGGTGAAGAACAAGGAAATTCGGAAACAGCGTAGCATTAATGAGCTCACAGCTATAGAAACCAAGGTGAAAGATATGTTGAATTGTGCTGAAGATAGAGAGGGTGATTTGTGTAACAAAAAATGTAGAAACTCTATTCAAGATTACACGAGCATATCCATCATAAATTCAGATGTTTTCTGCTGTGTGTGTAAAAGCTCAGGCAATGATGAAATCAACTGTTTGTTGGAGTGTAGTCAATGTTTAATTAGAGTGCATCAGGCTTGCTATGGCGTTTCTACATTGCCTAAAAATGGACGTTGGTGTTGCAGACCATGCCGAACAAACTCACAAAATATTGCCTGTGTCCTATGTGGTTATGGAGGTGGAGCTATGACTCAAGCAATACTGAGTCGGGCAATAGTTAAGAGCCTTCTTAAAGTGTGGAATGTTGAGAAAGATGGCATGCCTAAGCATACTACTTCATGTGAAGTTTTTGAAAAGGAAGTACATGCATTTCAATCCTCTAAATCTGGACTAGAAGTGAACCAAGAATGTGTCTCAAGGCCTGAAAATGTTGATACATCAAAAAGTCAGTTGAAATTTCAAATGTCACCAAGTCACATACAACAACACACCCTGTCCTCTGCTTCTAATTTTAAGGTGCATAACAGCATTACAGCAGGAGTTCTTGATCCAACTGTTAAACAGTGGGTTCACATGGTTTGTGGGCTTTGGACTCCCGGAACAAGATGCCCCAATGTTAACACCATGAGTGCTTTTGATGTATCTGGTGTTTCACGTCCAAAAGCAGATATGGTTTGTTCCATTTGCAATCGATGGGGTGGTTCCTGTATAGGGTGCAGGATTGCTGATTGCTCTGTCAAATTTCATCCTTGGTGTGCACATCAGAAGAACCTGTTGCAAAGTGAGACTGAAGGTATTGAGGGTGAGAAAATTGGATTTTATGGAAGATGCATGCTTCATGCTGTTGACTCTAGATGTCAGTCTGCATATAATCCTATTGATGAAATGGGCAGTCAAGAAGAAAGGGAATTCACCTGTGCCAGAGCAGAGGTTTACAAAGGCCGGAGATGGGATGGTTTTCAGACCAATCGTTACAGAGCCTTAAAAGCCCAGAGTGGATGCCTTGTTCCTGTGGAGCAGCTAAATGCTTGGATTCACATTAATGGGCAGAAATTGTGCTCACATGGACTCCCAAAATTTCCAGATTTAGACATTGAGCATGATTGTCGAAAGGAATACGCTCGGTACAAGCAAGCAAAGGGATGGAAACATCTTGTTGTATACAAATCCAGGATACATGCCCTTGGTCTTTACACTTCTCGGTTCATTTCCCGGGGTGAAATGGTTGTCGAGTATGTTGGTGAAATTGTGGGGCTGCGTGTGGCTGATAAAAGAGAAAATGAATATCAATCTGGAAGGAAACTTCAGTACAAGAGTGCCTGCTACTTCTTCAGGATAGACAAAGAGCATATTATTGATGCCACAAGGAAAGGGGGGATTGCTCGATTTGTAAACCACTCATGCCTGCCAAATTGTGTGGCAAAGGTGATTACTGTAAGGCACAAAAAGAAGGTTGTCTTCTTTGCAGAGAGGGACATATTCCCTGGTGAAGAAATTACGTATGATTACCATTTTAACAACGAAGATGAAGGAAAGAAGATTCCATGTTACTGCAATTCGAAAAATTGCAGGCGTTATATGAACTGA 4446 0.4022 MVEEQPQLKPKNYMSAISSASDAPKARSETNSMAKGLPFSQFDNQPKEKIKASENMMKVGVPIMPKNLPSDFSTMQFGFTNAPCSSNDHTGRQSNNSFPGMNKYLDSDKGVRFAEDTFAKINSGFGICRLVEYPNCMTRAVGGSNNCISAVNTKIYESNYESSLPSEASVAANFLHGTSNVSALGQDNHMTPETAIPFGGIFKGLPSLVSSSSSNHLPTLLQQQDNNMDAYFLDENMRLLALTQILELSKQQNTLYFHDMNQKQGRSCNFSKVQHYMCESSTSKQGTIGASLKLHQNRGTSGNAESTDSFENLASFTGLNRYCRLSGLAPIPLHSKEKESQCTHPYNLRNEEPSLSLGKNKENARSSACEKCSEQPSDNHLGGKYTGAAQVNYCRGNFFSGIESFSRDLNTSKDHFEQSGKLDGQDSSKIGSHTPQWGDVPGEVRKTVCDATSLDQMATGLDWEGQDSVQLGNISVKRLKRTIDMEDAWKAQENSNVSSGSSARVVSQASVEVNNVDSCTVDPVDTGFVNNLLVDEGSGIDQGRSSDVVESEQSDEFLGSTCGNYLKNGYMRILNDQPCRSLLDELKLLDSLIWKKGQDQNHFSANCKTHQSQRVKKGLKGKKRKRNELRIVDASFSSRISSLLHKKGGEGAGIFNSSSSLAKEMQMRCLSSLKRSSNKSSYVETGNKQRQIAFSSKSLSGENHLNRHGSAKVSYESELNSDAEFHTCPEVSGTKKLRKDFSSGCFEQCQMQKPAHEELEPENAKLRSFSCSKENAPRITRPIVCGKYGEISSGQLATEVPKPAKIVSLSMVLETSKRCMVPTNDIARLTSKKKWKTLSIGASIGQCCGNPGLKTTEHKETQNTIICDGADVDLPMEDLERGGKPPVIYTGKKATKAKQGDIIVNRADAPSKVKNKEIRKQRSINELTAIETKVKDMLNCAEDREGDLCNKKCRNSIQDYTSISIINSDVFCCVCKSSGNDEINCLLECSQCLIRVHQACYGVSTLPKNGRWCCRPCRTNSQNIACVLCGYGGGAMTQAILSRAIVKSLLKVWNVEKDGMPKHTTSCEVFEKEVHAFQSSKSGLEVNQECVSRPENVDTSKSQLKFQMSPSHIQQHTLSSASNFKVHNSITAGVLDPTVKQWVHMVCGLWTPGTRCPNVNTMSAFDVSGVSRPKADMVCSICNRWGGSCIGCRIADCSVKFHPWCAHQKNLLQSETEGIEGEKIGFYGRCMLHAVDSRCQSAYNPIDEMGSQEEREFTCARAEVYKGRRWDGFQTNRYRALKAQSGCLVPVEQLNAWIHINGQKLCSHGLPKFPDLDIEHDCRKEYARYKQAKGWKHLVVYKSRIHALGLYTSRFISRGEMVVEYVGEIVGLRVADKRENEYQSGRKLQYKSACYFFRIDKEHIIDATRKGGIARFVNHSCLPNCVAKVITVRHKKKVVFFAERDIFPGEEITYDYHFNNEDEGKKIPCYCNSKNCRRYMN* 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0197 1481 SMART PostSET_3 1465 1481 IPR003616 -
Apr9g0197 1481 MobiDBLite consensus disorder prediction 1 42 - -
Apr9g0197 1481 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1116 1234 IPR013083 -
Apr9g0197 1481 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 958 1032 IPR013083 -
Apr9g0197 1481 CDD ePHD 1141 1224 - -
Apr9g0197 1481 ProSiteProfiles Zinc finger PHD-type profile. 969 1020 IPR019787 -
Apr9g0197 1481 MobiDBLite consensus disorder prediction 11 39 - -
Apr9g0197 1481 SUPERFAMILY SET domain 1298 1477 IPR046341 -
Apr9g0197 1481 Pfam PHD-finger 984 1018 - -
Apr9g0197 1481 CDD SET_SETD1-like 1338 1477 - -
Apr9g0197 1481 Pfam PHD-zinc-finger like domain 1139 1213 - -
Apr9g0197 1481 SMART set_7 1336 1463 IPR001214 GO:0005515
Apr9g0197 1481 PANTHER HISTONE-LYSINE-N-METHYLTRANSFERASE 2 KMT2 FAMILY MEMBER 5 1481 - -
Apr9g0197 1481 Gene3D SET domain 1244 1481 IPR046341 -
Apr9g0197 1481 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE TRITHORAX 5 1481 - -
Apr9g0197 1481 MobiDBLite consensus disorder prediction 415 442 - -
Apr9g0197 1481 Pfam SET domain 1349 1456 IPR001214 GO:0005515
Apr9g0197 1481 ProSiteProfiles Extended PHD (ePHD) domain profile. 1117 1234 IPR034732 -
Apr9g0197 1481 ProSiteProfiles SET domain profile. 1336 1457 IPR001214 GO:0005515
Apr9g0197 1481 ProSiteProfiles Post-SET domain profile. 1465 1481 IPR003616 -
Apr9g0197 1481 MobiDBLite consensus disorder prediction 339 359 - -
Apr9g0197 1481 SUPERFAMILY FYVE/PHD zinc finger 966 1022 IPR011011 -
Apr9g0197 1481 SMART PHD_3 971 1018 IPR001965 -
Apr9g0197 1481 SMART PHD_3 1178 1234 IPR001965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0197 Apr-Chr9 2504839 2515479 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0197 1338 1477 C2H2 Transcription Factor Family AT2G23740 34.375 7.15e-17 85.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Apr9g0197 SET 1.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0197 - - aprc:113846680 3007.62