Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0192 ATGGGGAAGCCCACCGGGAAAAAAAAGGATCATGAAAGCCCGAAGGCAAACGGCAACAACAAACCAATGGAACGCGCGTCGTCCAAGGCCTTCGACGACGACACCGCGATGTTCATAAACATGTCGCACGAGCTGAAAGAAGAAGGAAATAAACTGTTTCAAAAGAAGGATCACGAAGCTGCCATGTTGAAGTACGAAAAAGCCCTCAAGCTTCTTCCAAAGAATCACATCGACGTCGCGCATCTTCACACCAACATGGCCGTGTGCTACATGCAGCTTGGCCTCGGCGAGTACCCACGCGCCATCAACGAGTGTAATTTGGCGTTGCAGGTCTCGCCTAGATATAGCAAGGCTTTGTTGAAGAGGGCTAAGTGTTATGAAGCGTTGAATCGGTTGGATTTGGCCATGAGGGACGTGCGCGTGGTGTTGAATGCGGAGCCCAATAATTTAACGGCTTTGGAGGTTTTGGATAGTTTGAGGAACACAATGGATGAGAAAGGGATAGTTGTTGATGAGACTCAGATTGCATTGGCCGCCCTGCAGCAGCAGCAGCAGCAGCAGCACGAGCCGCCGGCCGCCCGGTTGCGGAAGGTGGTGAGGGAGAAGATTAAGAAGAATAAGGGACATAAGGGAGAAGAGGAAGAAGGGAAAAGAGTGGTTGTTGAGGACAAGGTGAAGGTTGAGAGTGTTAAGAAGATGGATAGTTGTAATAATAATCATAAGGTTAAGGACAAGGACAAGGATAAGGATAAAGATAAAGGTAAGGGATTTAAGGGTAAGGATAAGGAGAAGAGGGAGGTCGTTGAGAATGAGAAACTTGGGAAGCAAGAAAAGGCAGTTACGAGGACAGTGAAGTTGATATATGGAGAGGATATTAGGTGGGCGCAATTGCCAGTGAATTGTAGTATGAAGATGGTGACGGATGTGATTAAGGATAAGTTTCCAGGGTTGAAGGGTGTTCTTGTTAAGTATAGGGATAGGGAAGGTGATTTGGTTACTATTACTACTACTGCTGAATTGAGGTTGGCTGAAACTTGTCATGTGCTGGGATCGATTCGGCTTTATGTCACACAGGTTGAGCCGGATCAAGAACCTTGTTATGATGAAAAGGGTAGTGATGGTGGGGTAAGGAAGGATGGAGGGAGGCTGATTGACAATGGAGGTGCTGATGGAGGCAGGGGTGTGGGTAATGGGATGACTACTGTGGAGGACTGGCTTGTTCAGTTTGCTAGGCTGTTCAAGAACCATGTTGGGTTTGATTCTGATGTGTATTTGGATATTCATGAGGTTGGGATGAAGCTGTATTCAGAGGCAATGGAGGATACAGTGACGAGTGAGGGTGCTCAAGAGCTGTTTGAGATTGCTGCAGATAGGTTTCAAGAGATGGCAGCTCTGGCGTTGTTTAATTGGGGAAGTGTTCACATGTCCAAGGCAAGGAAATGGGTGTCCTTTCCAGAGGACGGGTTGAGAGAATCTTCGTTTGAGCATATCAAGGCGGCATATGAGTGGGCTCAGAAGGAGTACATGAATGCAGAGATGAGATTTGAAGAAGCTGTGAGAATTAAGCCCAACTTTTATGAAGGACTTCTTGCTCTTGGGTATCAGCAGTTTGAGCAAGCAAAGCTCACTTGGTGTTATTTAATTGCAAACAATAAGGATTTAGAAGTTGGTCATTTTGATGAGGTTCTACAGCTATATAACAAGGCAGAGGATAGCATGGAGAAAGGCATGTTGATGTGGGAGGAGATTGAGGAGCAGCGTTTGAATGGAATATCCAAATCAGATAAATATAAAGAGCAGTTAGAGAAAATGGGTTTGCATGGTCTTTTCAGGGATGTTTCTGCTGATGAAGCTGAAGAGCAGGCTGCAAGGATGAGGTTGCAAATATATCTTTCATGGGGCACCTTATTGTATGAGCGTTCTGTTGTGGAATATAAGCTAGGCCTGCCAACTTGGGAGGAATGTTTGGAGGTTGCAGTTGAAAAGTTTGAACTAGCTGGAGCTTCTCCAACTGACATTGGTGTCATGATAAAGAACCATTGTTCTAATGAAACAGCCATGGAAGGGTTCAAAATTGATGAGATAGTGCAAGCGTGGAATGAGATGTATGATGGGTGGCAGTTTGATGTTCCATCATTTCGACTTGAACCATTGTTTCGTCGGCGTGCTCCAAAATTCCATTACATCCTGGAGCAATTTTGA 2202 0.4555 MGKPTGKKKDHESPKANGNNKPMERASSKAFDDDTAMFINMSHELKEEGNKLFQKKDHEAAMLKYEKALKLLPKNHIDVAHLHTNMAVCYMQLGLGEYPRAINECNLALQVSPRYSKALLKRAKCYEALNRLDLAMRDVRVVLNAEPNNLTALEVLDSLRNTMDEKGIVVDETQIALAALQQQQQQQHEPPAARLRKVVREKIKKNKGHKGEEEEGKRVVVEDKVKVESVKKMDSCNNNHKVKDKDKDKDKDKGKGFKGKDKEKREVVENEKLGKQEKAVTRTVKLIYGEDIRWAQLPVNCSMKMVTDVIKDKFPGLKGVLVKYRDREGDLVTITTTAELRLAETCHVLGSIRLYVTQVEPDQEPCYDEKGSDGGVRKDGGRLIDNGGADGGRGVGNGMTTVEDWLVQFARLFKNHVGFDSDVYLDIHEVGMKLYSEAMEDTVTSEGAQELFEIAADRFQEMAALALFNWGSVHMSKARKWVSFPEDGLRESSFEHIKAAYEWAQKEYMNAEMRFEEAVRIKPNFYEGLLALGYQQFEQAKLTWCYLIANNKDLEVGHFDEVLQLYNKAEDSMEKGMLMWEEIEEQRLNGISKSDKYKEQLEKMGLHGLFRDVSADEAEEQAARMRLQIYLSWGTLLYERSVVEYKLGLPTWEECLEVAVEKFELAGASPTDIGVMIKNHCSNETAMEGFKIDEIVQAWNEMYDGWQFDVPSFRLEPLFRRRAPKFHYILEQF* 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0192 733 MobiDBLite consensus disorder prediction 231 268 - -
Apr9g0192 733 PANTHER PROTEIN PHOX4 1 732 - -
Apr9g0192 733 SMART PB1_new 281 359 IPR000270 GO:0005515
Apr9g0192 733 Pfam PB1 domain 281 358 IPR000270 GO:0005515
Apr9g0192 733 MobiDBLite consensus disorder prediction 365 391 - -
Apr9g0192 733 SUPERFAMILY TPR-like 37 157 IPR011990 GO:0005515
Apr9g0192 733 MobiDBLite consensus disorder prediction 1 28 - -
Apr9g0192 733 Gene3D - 274 358 - -
Apr9g0192 733 MobiDBLite consensus disorder prediction 1 18 - -
Apr9g0192 733 ProSiteProfiles PB1 domain profile. 281 359 IPR000270 GO:0005515
Apr9g0192 733 PANTHER PROTEIN CLMP1 1 732 IPR044517 -
Apr9g0192 733 CDD PB1 283 356 - -
Apr9g0192 733 MobiDBLite consensus disorder prediction 365 384 - -
Apr9g0192 733 ProSiteProfiles TPR repeat profile. 42 75 IPR019734 GO:0005515
Apr9g0192 733 SMART tpr_5 42 75 IPR019734 GO:0005515
Apr9g0192 733 SMART tpr_5 116 149 IPR019734 GO:0005515
Apr9g0192 733 SMART tpr_5 80 115 IPR019734 GO:0005515
Apr9g0192 733 SMART tpr_5 492 525 IPR019734 GO:0005515
Apr9g0192 733 SUPERFAMILY CAD & PB1 domains 281 368 - -
Apr9g0192 733 Gene3D Tetratricopeptide repeat domain 40 167 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0192 Apr-Chr9 2456877 2461413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0192 30 149 Calmodulin-binding Proteins AT3G25230 31.008 4.12e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0192 - - vra:106765155 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0192 9 2456877 2461413 Apr5g1285 5 17158313 17160526 PCT