Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0180 ATGTCTTGGGGTTTGTGCAATCTGCTGAATTATTTAATGAATATTACAACTTCAGATCCAAGGATGTCTAAAGAAGCTGTTGCTACTCCATCAGCTGCGTCTTTTGAGTATGAGATATTGGATAGTGATGCTGACATCCTTAGAACTGTTAGACCCTCATCCAGTCGTGCAAATCCATGGATTGAACCTGAAAGGTTGAAACTTAGACACAGAATTGGCCGTGGCCCTTTTGGTGATGTTTGGCTAGCAACTCATCATCAGTCAACTGAAGATTATGATGAGTACCATGAAGTCGCTGCTAAAATGTTACATCCAATCAGAGAGGATCATATGAATATTGTACTAGAGAAGTTCAGTGAATTATATTTTAAGTGCCAAGGAGTTGCTAGCGTATCCTGGCTACATGGAATTTCAATCTTAAATGGAAGGATAAGCATCATTATGAATTTGTATGAGGGTTCTATTGGTGACAAGATGGCTAGACTCAAAGAAGGAAGAATTTCGTTGCCTGATGTTTTGAGGTATGGAATCAATCTGGCTCAAGGTGTTCTGGAACTTCACACTAAAGGGATCCTCATTCTCAACCTTAAACCATTTAATGTTCTTCTCAATGATAATGATCAAGCAATTTTGGGAGATATTGGTATTCCCAGTCTTTTTCTTGGCTCTTCATTCCTATACTCAGATATGGCTCAGAGGCTTGGAACTCCAAATTACATGGCTCCAGAGCAATGGGAACCAGAGGTCAGAGGTCCTCTGTCATTTGAAACAGATTCTTGGGGGTTTGGGTGCACCATTGTTGAAATGTTGACTGGTAACCAACCGTGGTATGGATGTCCTGTTGGCAAAATACACCAATTGATTGTTGAAAAGCATGAAAAACCCCTTATTCCAAGTGGTCTTCCTTCTTCCCTTGAGAATATCCTCAGTGGTTGCTTTGAGTATGATTTGAGGAATCGCCCTTTAATGGTAGATATTCTGAATGTCTTTAAAAGCTCACTGAATGAACTGGCCAATGATGGAGGATGGAGATATCTAGGGAATGTGAAAGTTATTTCAAAATCAGGTAGCACTGGCTACACAGAATGGTTCCTCTCAAAGGATCATCTTCAGGTGGGGGACATGGTCCGATCTAGAAAGCCTTCCAATTCTTGCAAGCCTCAAAACATGGATGTCTCAGAAGGAACTGTTGTTGGTTTAGATCGTAATGCGGATCAAGGGTTTGTTCTTTTGAGAGTCCATGGTGTTCATGACCCCATTAGAATTCACATGTCAACTCTTGAACGTGTCACCTTTGGCTTGGCAGCTGGTGATTGGGTACGCTTGAGGGATGAAAATGAGAAGCACTCACCAGTGGGCATTCTACATTCCATCGACCGTGACAGTAGAGTGGCTGTTGGATTTATAGGGCTGCAAACTCTTTGGAATGGAAACTCTTCAGAACTTGAAATGGCTGAACCATACTGCATGGGCCAGTTTGTTAGGCTGAAAGACAAAGTTTCGAGTCCTCGATTTGAATGGCGTCATAAAAGGGGAGGGGCCTGGGCTACTGGCAGGATTTCATGGATTCTACCGAATGGGTGTTTGGTTGTGAAGTTCCCAGGGATGCTTACTTTTGGCAATGAACCAAGCACCTACTTGGCTGATCCCTCTGAGGTTGAAGTGGTTGATTTTAGGACTTGTCCTGGGATGATAGATAAGTACCAACATGTAGAGGATCATCACTGGGCTGTTAGACCTGTTCTAATCGCATTCGGTTTATTTACTGCTTTAAAACTAGGCATATTAGTTGGAAAGAAAGTGAGGAGGAACAGGAAGGTCAATGCAATAGACAGTGAAAGTCAATATCTTGATGGTCAAAATGCTAGCAGTGCTACAACAAGGAGATCTTCTACTGCTATAAATCAAGGCAACACAACATGGGTTCCTTCAGTGGCTAACATCCTTTTTAAAGAGGGTGTTAACACTTCCAATGGTCGGTAG 1983 0.4216 MSWGLCNLLNYLMNITTSDPRMSKEAVATPSAASFEYEILDSDADILRTVRPSSSRANPWIEPERLKLRHRIGRGPFGDVWLATHHQSTEDYDEYHEVAAKMLHPIREDHMNIVLEKFSELYFKCQGVASVSWLHGISILNGRISIIMNLYEGSIGDKMARLKEGRISLPDVLRYGINLAQGVLELHTKGILILNLKPFNVLLNDNDQAILGDIGIPSLFLGSSFLYSDMAQRLGTPNYMAPEQWEPEVRGPLSFETDSWGFGCTIVEMLTGNQPWYGCPVGKIHQLIVEKHEKPLIPSGLPSSLENILSGCFEYDLRNRPLMVDILNVFKSSLNELANDGGWRYLGNVKVISKSGSTGYTEWFLSKDHLQVGDMVRSRKPSNSCKPQNMDVSEGTVVGLDRNADQGFVLLRVHGVHDPIRIHMSTLERVTFGLAAGDWVRLRDENEKHSPVGILHSIDRDSRVAVGFIGLQTLWNGNSSELEMAEPYCMGQFVRLKDKVSSPRFEWRHKRGGAWATGRISWILPNGCLVVKFPGMLTFGNEPSTYLADPSEVEVVDFRTCPGMIDKYQHVEDHHWAVRPVLIAFGLFTALKLGILVGKKVRRNRKVNAIDSESQYLDGQNASSATTRRSSTAINQGNTTWVPSVANILFKEGVNTSNGR* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0180 660 PANTHER OS06G0639500 PROTEIN 22 657 - -
Apr9g0180 660 CDD STKc_PknB_like 67 321 - -
Apr9g0180 660 SUPERFAMILY Protein kinase-like (PK-like) 63 330 IPR011009 -
Apr9g0180 660 PANTHER OS06G0639500 PROTEIN 22 657 - -
Apr9g0180 660 Pfam Protein tyrosine and serine/threonine kinase 66 328 IPR001245 GO:0004672|GO:0006468
Apr9g0180 660 Gene3D Phosphorylase Kinase; domain 1 44 127 - -
Apr9g0180 660 ProSiteProfiles Protein kinase domain profile. 66 334 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0180 660 Gene3D Transferase(Phosphotransferase) domain 1 152 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0180 Apr-Chr9 2324174 2329699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0180 61 337 MAP Kinase Kinase Kinase AT2G17700 25.000 1.88e-17 84.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Apr9g0180 PK_Tyr_Ser-Thr 4.8e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0180 - - gsj:114393396 1122.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0180 9 2324174 2329699 Apr9g0180 9 2324174 2329699 ECH
Apr9g0180 9 2324174 2329699 Apr5g1271 5 17031817 17038617 PCT