Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0176 ATGATTCAGCTGATTGAGACTGGAAATTTCTCTCGGGGTTTTGAAGGTTCTCAAATGAATTGGGTTGATAGGAATGGCCTGTTCCTCGTGTCATATAAAGGAGAATTTGGCTTTGGCTTTGTAACCACAGAAAATGACTACACATTGTTTCTACTAGCTATATTCCACATGAACAGCAACAAGGTGGTTTGGGTTGCAAATAGAGCAAATCCTGTGTCTAATTCTGATAAATTTGTGTTTGATGAGAAGGGTAATGTCTTTTTACAGAAAGGAGGAAGGGTGGTATGGTCAACAGATACAAGTGGCAAGGGAGTTACTTTAGTGGAATTGCAAGACACTGGAAATTTGGTTTTGGTTGGGAGCGATAGTAGAGTGATATGGCAAAGTTTCAGCCACCCAACAGACACCTTGTTGCCAATGCAGGACTTCATTGAGGGAATGAAACTTATCAGTGAACCTGATTCTAACAACTTGTCCTATGTTCTCGAGATTGAACATGGTAATGTCATTCTTTCCGCGGGTTTGCAAACTCCACAGCCTTATTGGTCTATACAGAAAGATAGCCCCAATAAAAATGGTGATGTGGTGGTAGCTTCAGCTACACTTAGTGCAAACTCTTGGAAATTCTATGATAAGAATAAATCCTTGTTGTGGCAATTTGCTTTTGCTGAAGAATCAGCTGCAAATGTCACTTGGATTGCAATTCTTGGAAGTGATGGCTTCATCACTTTCTCCAATCTCCAAAGTAAAGGGTCAATTGGTGCCTCACCAAAAAGAATACCACAAGATTCTTGTAGCACACCACAACCTTGTGATCCCTATAGCATATGCAGTGGTCAGAAAAAATGTAGCTGCCCTTCTGTTCTTAACTCTCGTCCTAATTGCAAACCGGGGTTGGTCTCACCTTGTGACTCAAAAAGCACCGTTGAGCTCCTCAAAGCTGATGATGGACTCAATTACTTTGCACTTGAGTTTCTTCCACCCTCTTCAAGAACTGATTTGGTTGGTTGCAAAACTTCTTGCAGTGAAAAATGCTCATGCCTTGCTTTGTTCTTCCACAAAAGTTCAGGGAATTGTTTCCTGTTAGACAGAATTGGAAGCTTTCAGAAATCTGATAAGGATTCTGGTTTTGTCTCATTCATTAAGGTCTCTAGTGAAGGAGGCACTATCACACACAGTAGAAGCAGCAATGTGCAGACAATAGTTGTTGTGATCATTGTCATACTAACATTGTTTGTCATTTCGGGTATGCTCTTTGTGGCACTTAGATGCTTCAGGAAAAGGCAAAATTTGCCTCCTGAGTCTCCTCAAGAGAATTCAGAAGATGAAACCATTTTGGAGACTTTAACAAGCATGCCAATCCGTTACAGCTACAATGATCTAGAAACAGCAACAAGTAACTTCTCTTTGAAACTTGGACAAGGTGGTTTTGGCTCAGTATACAAAGGAGTTCTGCCAGATGGGACTCAACTAGCTGTGAAGAAGTTGGAAGGCATAGACCAAGCGAAGAAAGAGTTCAGGGTTGAAGTTAGTACTATTGGGAGAATTCATCACCACCATTTGGTTAGGCTTAAAGGATTCTGTGCCGAAGGGTCTCATAGGCTTCTAGCTTATGAGTACATGGCCAATGGCTCATTGGATAAATGGATATTTAATAAGCATATAGGTGCATTTGTGTTGGATTGGGACACAAGGTTTAACATAGCACTTGGGACAGCAAAAGGACTAGCTTACCTACATGAAGATTGCGACTCAAAGATTGTTCATTGTGATATCAAGCCAGAAAATGTGCTTCTAGATGATAACTTCCTAGCCAAGGTTTCAGATTTTGGTTTGGCTAAGCTCATGACACGTGAACAAAGCCATGTTTTCACCACACTTAGGGGCACTAGGGGCTATCTTGCACCAGAATGGATCACAAACTATGCTATATCTGAGAAAAGTGATGTTTATAGCTATGGAATGGTGTTGCTAGAGATCATTGGGGGAAGGAAAAACTATGATCCTAGTGAAACTTCAGAGAAATCCCATTTCCCTACTTTTGCTTTTAAGATGATGGAAGAAGGGAAGGTGAAAGAGATTCTTGATTCAAAGATAGAAACATGTGAAAATGAAGAGAGGGTTGACACTGCTGTTAAAATTGCATTGTGGTGCATACAAGAAGACATGTCTTTAAGGCCTTCTATGACCAAAGTTGTACAAATGCTAGAGGGTCTCTCTAGTGTTCCTAAGCCACCAACTTGTAGTGTTTTTGGTTCTCGGTTTTATTCAACTTTACCCATGAGTGAGGCTGGCACTTCTTCAGGACCATCAGATTGTAATAGTGAAGCCTATCTCTCTGCTGTTCAGCTTTCAGGACCAAGATAA 2367 0.4085 MIQLIETGNFSRGFEGSQMNWVDRNGLFLVSYKGEFGFGFVTTENDYTLFLLAIFHMNSNKVVWVANRANPVSNSDKFVFDEKGNVFLQKGGRVVWSTDTSGKGVTLVELQDTGNLVLVGSDSRVIWQSFSHPTDTLLPMQDFIEGMKLISEPDSNNLSYVLEIEHGNVILSAGLQTPQPYWSIQKDSPNKNGDVVVASATLSANSWKFYDKNKSLLWQFAFAEESAANVTWIAILGSDGFITFSNLQSKGSIGASPKRIPQDSCSTPQPCDPYSICSGQKKCSCPSVLNSRPNCKPGLVSPCDSKSTVELLKADDGLNYFALEFLPPSSRTDLVGCKTSCSEKCSCLALFFHKSSGNCFLLDRIGSFQKSDKDSGFVSFIKVSSEGGTITHSRSSNVQTIVVVIIVILTLFVISGMLFVALRCFRKRQNLPPESPQENSEDETILETLTSMPIRYSYNDLETATSNFSLKLGQGGFGSVYKGVLPDGTQLAVKKLEGIDQAKKEFRVEVSTIGRIHHHHLVRLKGFCAEGSHRLLAYEYMANGSLDKWIFNKHIGAFVLDWDTRFNIALGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDNFLAKVSDFGLAKLMTREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDPSETSEKSHFPTFAFKMMEEGKVKEILDSKIETCENEERVDTAVKIALWCIQEDMSLRPSMTKVVQMLEGLSSVPKPPTCSVFGSRFYSTLPMSEAGTSSGPSDCNSEAYLSAVQLSGPR* 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0176 788 ProSitePatterns Protein kinases ATP-binding region signature. 472 495 IPR017441 GO:0005524
Apr9g0176 788 Gene3D Phosphorylase Kinase; domain 1 433 540 - -
Apr9g0176 788 PIRSF SRK 3 785 IPR024171 GO:0004674
Apr9g0176 788 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 184 IPR036426 -
Apr9g0176 788 CDD STKc_IRAK 472 739 - -
Apr9g0176 788 Pfam Protein kinase domain 471 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0176 788 Pfam D-mannose binding lectin 62 142 IPR001480 -
Apr9g0176 788 Gene3D - 23 132 IPR036426 -
Apr9g0176 788 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 6 788 - -
Apr9g0176 788 SUPERFAMILY Protein kinase-like (PK-like) 445 737 IPR011009 -
Apr9g0176 788 ProSitePatterns Serine/Threonine protein kinases active-site signature. 587 599 IPR008271 GO:0004672|GO:0006468
Apr9g0176 788 SMART serkin_6 466 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0176 788 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE SD2-5 6 788 - -
Apr9g0176 788 SMART blect_4 20 133 IPR001480 -
Apr9g0176 788 ProSiteProfiles Protein kinase domain profile. 466 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0176 788 Gene3D Transferase(Phosphotransferase) domain 1 541 744 - -
Apr9g0176 788 CDD B_lectin 25 133 IPR001480 -
Apr9g0176 788 ProSiteProfiles Bulb-type lectin domain profile. 14 131 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0176 Apr-Chr9 2292926 2296344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0176 398 746 Receptor kinase-like Gene Family AT5G20050 43.117 6.40e-94 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Apr9g0176 Pkinase 2.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0176 - - gmx:100787500 1279.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0176 9 2292926 2296344 Apr9g0176 9 2292926 2296344 ECH
Apr9g0176 9 2292926 2296344 Apr5g1264 5 16988719 16992265 PCT