Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0166 ATGATGGATTCTCCAGAACCTTCTAAGAAGAATGTTAGTTCTTCTGCCTCCACTCTCAATGCCACTCCTTCATCTGAATCCCCTCAAGTTCAAGAATCCCCCTTTTTAAGATTTGTAAACACTTTGTCTCCAATAAAGCCCGTCAAGGCTAGCCATGTGGTTGGACAAAGTTTTCTAGGACTCAATTCTCCACCGCTTGTATTCAAGTCACCACGAGTTTGTTACCGTGAAACACATTTCATGGAAAGGTCTCAAAGCACTCAGTTGCTCACTGGAGAAACATCTCAGAGTGAAAATGGAGGCACCAGTCTTGGGGAAGCTCCTGGTGATTCCAGCAAACCAGATTCTCAGCAGCCACGGCCAGAGAGATTTATAACTGACACTCGGGAGGTTTTTGACTCCAGGAATGGTGCAAATACTCAGAATTGCAGTCCTCCATCATCTGTTGATGAATATTTGGCTGATCCCAGGGATGTTGATCGAATGTATTTGGCCAACCAAGATGTGGAACACTCTACTGATGCAGCTGAAGCATCATCACTAAGTGACTTAACTCAGTCAAAGAAAAGTACATTAAAATTTGATAGGAAAGATTGTCCAGGTGATAAAGCAGAAGACATTTTGCCTTTGTCAGAGGAATCTGAAAAGGGTCATCAAGAAAAGCCAGCATATGGGGAAGAACCTGGAAAGATAGCAGGGGAGAAAAATGACGTTGAATGGGCTTCTCAAGAGCACAGAGAGTTAGAGTCCAATTCAGCTTCAGGTGTTTTTGAGAAACAATCTTGTCATGATTCACTTCCCCAGGATTTTAATGGATGTGAAGATTACAATAAGATGGTATCAACTTCACATGTAACTTCAGAGAATCTCTCACAAGATGGTTCTGAGGCTAGTCTAAAGTACCATGGCATTCGTAGACGCTGCCTACAATTTGAGGAAGGTGCTTCCGATGCTTTTGGAAGTAACAAGTCCAATGTGAAATTGAATGCGACTTCAAGCGAAATGAAAACGGTTAAGCCGTCCGAACATATTAGTTCCTCGTTTCCTCAGCGAGGTAGTGGAAACTTCCCTGTGACAGGTCCCAAGCCATCAGGTATTGGGTTGCATTTAAATAGCATAATAAATGCTATGCCAACTGGTCGTGCTACAACTACGAGTATGCGGTTATCAGATGGTTTACAGGGGATGAAACCCAAATCTTCAATAAGCTTATATAGAGTGGAGAACATGAAGAGATCCGTACTTACATCTAATGTGGATGGGCAATCATTAGTTGATATTAGAAATGAAAGCCATGACATTGCTGCTTCAGTAGCTACAAATTCTTTCATCTCTGGAAATTCTGAGGAGTTCAACCAACCTAGCCCCTCCAAGAAAAAGAGGAAAACATCTAGCACTGCTGATGACAATGGCCCTAAACGGTGCAACTGTAAGAAAAGTAAATGTTTAAAACTTTACTGTGACTGTTTTTCTGCTGGACCCTATTGTTCCGAGTCTTGTACTTGCCAAGGCTGCTTAAATAGACCAGAATATGCGGAGACAGTTACTGAGACTAAACAACAAATTGAATCCCGTAATCCACTTGCATTTGCTCCCAAGATTGTACAATCTACCACTGATATTTCATCTAATATGGAGGATATAAATCTGACGACACCATCATCGGCAAGGCACAAAAGAGGTTGCAATTGCAAAAGGTCAATGTGTCTGAAAAAATATTGTGAATGTTATCAGGCTAATGTTGGATGTTCTAGTGGATGTCGATGTGAGGGATGTAAGAATATCTATGGCAAGAAAGAAGATTATGTTGCATCAGAACACTCTTTAAGTAAAGAAAGGGTGGGCAGTAGTGTTGAGAAAGGAGGATCAGACAGCACATTTCCCAATAAACCGGAAGCGGTAGCAAGCAAGACACATTATGATTTACAAGGCCTCTCACCTATAACGCCATCATTGCAATGCTCTGACCAAGGCAAGGAGGCCGCAAAATCCAGACTTCTTTCTGGAAACTTCCAACCATCCCCTGAATCTGATGTTAGTATGTTCTCATCTCAAGCAAGATACACTGAATCTTCTGAAAATTTGCACACCAGTCAAGCACTTCCGGAAACAAATGAGATGTTGGGAACTGCCCCCTATGATTCACAAATTGACTGCAGCAATATGAACACGGTGGATCAGTCATCACCAAATAATTCAGGTGTTATCTTACCTCAGCTTATTCCTGTGTCCAACCCGGAGTCAATGTCTTGTGCTTCATCGTCCTCATCTAGAACATTCGAGAGGACAAATATTCCACAATCGCTACTTTCCCAAGGAAGTTTTCGCCAGTTGCCTGGAGGCTCTCTTCGTTGGCGTAGTTCCCCGGTTACCCCAACGACTAGAGCGGGGGAAACTCAATATTTACAATGTCCTGAATCAGATAGCAGACTCTTTGACATTCTAGAAAATGACACCCCTGATATACTGAAGGAAGCTTCAACTCCCATAACATCTGTGAAAGTAAATTCCCCAACCCAAAAGCGAGTTTCTCCTCCCCAGAGTCATCATCATGGGATCGGATCAAACTCCTCTGGAGGCTTGAGAAGTGGCAGGAAATTTATATTGCAAGCTGTACCTCCTTTCCCACCGTTGACTCCTTGCGTTGATTCCAAAGGCAATAGCGATGAGGATTTGAATGAAAAAGCCAAGGACAAAAAAGACAACGAAGCTAAGGACAAACAATCTCAAAGCTAA 2736 0.4247 MMDSPEPSKKNVSSSASTLNATPSSESPQVQESPFLRFVNTLSPIKPVKASHVVGQSFLGLNSPPLVFKSPRVCYRETHFMERSQSTQLLTGETSQSENGGTSLGEAPGDSSKPDSQQPRPERFITDTREVFDSRNGANTQNCSPPSSVDEYLADPRDVDRMYLANQDVEHSTDAAEASSLSDLTQSKKSTLKFDRKDCPGDKAEDILPLSEESEKGHQEKPAYGEEPGKIAGEKNDVEWASQEHRELESNSASGVFEKQSCHDSLPQDFNGCEDYNKMVSTSHVTSENLSQDGSEASLKYHGIRRRCLQFEEGASDAFGSNKSNVKLNATSSEMKTVKPSEHISSSFPQRGSGNFPVTGPKPSGIGLHLNSIINAMPTGRATTTSMRLSDGLQGMKPKSSISLYRVENMKRSVLTSNVDGQSLVDIRNESHDIAASVATNSFISGNSEEFNQPSPSKKKRKTSSTADDNGPKRCNCKKSKCLKLYCDCFSAGPYCSESCTCQGCLNRPEYAETVTETKQQIESRNPLAFAPKIVQSTTDISSNMEDINLTTPSSARHKRGCNCKRSMCLKKYCECYQANVGCSSGCRCEGCKNIYGKKEDYVASEHSLSKERVGSSVEKGGSDSTFPNKPEAVASKTHYDLQGLSPITPSLQCSDQGKEAAKSRLLSGNFQPSPESDVSMFSSQARYTESSENLHTSQALPETNEMLGTAPYDSQIDCSNMNTVDQSSPNNSGVILPQLIPVSNPESMSCASSSSSRTFERTNIPQSLLSQGSFRQLPGGSLRWRSSPVTPTTRAGETQYLQCPESDSRLFDILENDTPDILKEASTPITSVKVNSPTQKRVSPPQSHHHGIGSNSSGGLRSGRKFILQAVPPFPPLTPCVDSKGNSDEDLNEKAKDKKDNEAKDKQSQS* 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0166 911 MobiDBLite consensus disorder prediction 172 188 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 189 232 - -
Apr9g0166 911 SMART CXC_2 470 511 IPR033467 -
Apr9g0166 911 SMART CXC_2 557 598 IPR033467 -
Apr9g0166 911 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 4 2 890 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 7 32 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 132 148 - -
Apr9g0166 911 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 2 890 IPR044522 GO:0003700
Apr9g0166 911 MobiDBLite consensus disorder prediction 747 778 - -
Apr9g0166 911 Coils Coil 231 251 - -
Apr9g0166 911 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 473 508 IPR005172 -
Apr9g0166 911 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 560 594 IPR005172 -
Apr9g0166 911 MobiDBLite consensus disorder prediction 784 799 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 1 32 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 454 472 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 334 356 - -
Apr9g0166 911 ProSiteProfiles CRC domain profile. 471 597 IPR005172 -
Apr9g0166 911 MobiDBLite consensus disorder prediction 81 115 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 153 167 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 747 799 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 116 130 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 824 863 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 334 354 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 81 232 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 887 911 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 823 911 - -
Apr9g0166 911 MobiDBLite consensus disorder prediction 445 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0166 Apr-Chr9 2190984 2196805 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0166 279 600 CPP Transcription Factor Family AT3G22760 40.673 1.78e-58 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Apr9g0166 TCR 5.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0166 K21776 - gmx:547664 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0166 9 2190984 2196805 Apr9g0166 9 2190984 2196805 ECH
Apr9g0166 9 2190984 2196805 Apr1g0506 1 6240820 6242880 PCT