Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0156 ATGGCTTCAACGACGATGGCGCATTCAAGTTCTTGGGGTAGGGCACTCGTCGCGATCTCTCCTTACACCTTCTCCGCCATCGGAATCGCCATCTCAATCGGCGTCTCCGTACTCGGCGCTGCCTGGGGAATTTACATCACCGGTAGTAGCTTGATCGGTGCTGCAATCAAGGCACCTCGAATCACTTCTAAAAATCTTATTAGTGTAATCTTCTGTGAGGCTGTTGCTATATATGGTGTTATTGTGGCAATTATTCTACAAACAAAATTAGAAAGTGTTCCATCCTCAAGTATCTATGAACCTGAATCTCTTAGAGCTGGATATGCAATCTTTGCTTCTGGAATTATCGTGGGCTTTGCAAATCTTGTTTGTGGGTGTGTATTCTTTTTTACCTACATCTCATACGTTTATTTTTCCTTTGATAGGTTGTGTGTAGGAATAATTGGAAGCAGTTGTGCGTTGTCTGATGCTCAGAATTCTTCTCTCTTCGTGAAAATTCTTGTGATTGAGATCTTTGGAAGCGCGCTTGGGCTATTTGGAGTTATTGTTGGAATCATCATGTCTGCTCAAGCAACGTGGCCATCAAAAGTTTAG 594 0.4293 MASTTMAHSSSWGRALVAISPYTFSAIGIAISIGVSVLGAAWGIYITGSSLIGAAIKAPRITSKNLISVIFCEAVAIYGVIVAIILQTKLESVPSSSIYEPESLRAGYAIFASGIIVGFANLVCGCVFFFTYISYVYFSFDRLCVGIIGSSCALSDAQNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0156 197 CDD ATP-synt_Vo_c_ATP6F_rpt2 106 187 - -
Apr9g0156 197 Pfam ATP synthase subunit C 111 187 IPR002379 GO:0015078|GO:0033177|GO:1902600
Apr9g0156 197 Pfam ATP synthase subunit C 27 86 IPR002379 GO:0015078|GO:0033177|GO:1902600
Apr9g0156 197 SUPERFAMILY F1F0 ATP synthase subunit C 103 188 IPR035921 -
Apr9g0156 197 Gene3D - 139 193 IPR035921 -
Apr9g0156 197 Gene3D - 22 132 IPR035921 -
Apr9g0156 197 SUPERFAMILY F1F0 ATP synthase subunit C 20 89 IPR035921 -
Apr9g0156 197 PANTHER V-TYPE PROTON ATPASE 21 KDA PROTEOLIPID SUBUNIT 5 195 - -
Apr9g0156 197 PRINTS Vacuolar ATP synthase 16kDa subunit signature 38 64 IPR000245 GO:0033179|GO:0046961|GO:1902600
Apr9g0156 197 PRINTS Vacuolar ATP synthase 16kDa subunit signature 65 88 IPR000245 GO:0033179|GO:0046961|GO:1902600
Apr9g0156 197 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 5 195 - -
Apr9g0156 197 CDD ATP-synt_Vo_c_ATP6F_rpt1 24 86 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0156 6 196 Primary Pumps ATPases(2) AT4G32530 81.863 2.04e-109 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0156 K03661 - gmx:100778175 294.664