Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0153 ATGGAGGGTAGTGACATATCAAGAGTTGAAAGTCTAAGAGCTAGTAGTTCTAGCATATGGAGGAACCATAGCATGGATGTTTTCTCAACATCTGAACGTGAAGATGATGAAGAAAATCTCAAATGGGCAGCAATAGAGAGGCTCCCAACATATCTACGCATTAGAAGAAGCATACTCCGCAGTGAAGATGGGAAAGGAAGAGAGGTTGATATCAAGCAACTGGGCTTAACAGAGAAAAAGATTCTTCTAGAGAGACTTGTGAAAATAGCAGAAGAAGATAATGAAAAGTTCTTGTTGAAACTCAGGGAAAGAATGGACAGAGTTGGGCTTGATATTCCAACCATTGAAGTTCGATTTGAGCATATAAATGTGGAAGCACAAGTTTATGTTGGAGGTAGAGCGTTGCCTTCATTACTAAACTTCTATGTTAATGTAATAGAGGGGTTCTTGAATTATCTGCACATAATTCCAAGTCCAAAGAAAACTTTAAATATTCTTCAGAATATTAGTGGAATCATAAGGCCTAGAAGAATGACATTGCTTTTGGGGCCCCCAGGCTCTGGAAAGACCACTTTGTTGTTGGCATTGGCTGGAAAACTTGGTAAAGATTTGAAACATTCTGGGAGAGTAACATACAATGGGCATGGGCTTGAAGAGTTTGTGCCACAAAGGACATCCGCATATGTAAGTCAACATGATAACCACATTGGAGAAATGACTGTGAGAGAAACACTAGCTTTCTCAGCAAGATGTCAAGGGGTTGGACAGAATTATGAGATGTTGACTGAACTACTAAGAAGAGAGAAGCAAGCAAAGATTATACCAGATCCTGATATTGATGCCTATATGAAGGCAGCAGCACTAGAAGGACAACAAACAAGTGTGGTCACTGACTATATTCTTAAGATTTTGGGACTTGAAGTCTGTGCTGACATTATGGTTGGAGATGGAATGATAAGAGGTATCTCAGGAGGGCAGAAAAAGAGAGTCACAACAGGGGAGATGCTGGTTGGACCTATAAAAGTGCTCTTCATGGATGAGATATCAACTGGTTTGGACAGTTCCACAACTTTTCAGATAATCAACTCAATCCGGCAATCCATTCATATTCTGAATGGAACTGCACTTGTGTCTCTGCTACAGCCAGCACCAGAAACTTATCAACTATTTGATGATATAATACTTCTGACAGATGGACAAATTGTGTACCAAGGACCAAGAGAAAATGTACTTGAGTTCTTTGAATCAATGGGTTTCAGGTGTCCTGAGAGAAAAGGAGTCGCTGACTTCTTACAAGAAGTGACATCAAGAAAAGATCAATGGCAATATTGGGCACGTAAGGATGAACCTTACAGCTTTGTCACTGTCAAGGATTTTGCAGAAGCATTCCAGTTATTTCACATTGGTCAAAAACTTGGAGACGAGCTAGTCAATCCTTTTGATAAGTCTAAATGCCATCCAAATGCCTTGACCACTAAGAAGTATGGTGTTGATAGGATGGAGCTGCTGAGGGCTTGTTCTAGCAGAGAATTTTTACTTATGAAGCGAAATTCATTTGTCTACGTATTCAAAGTCACCCAACTCATCTATTTAGCTATCATGACAACAACATTATTTCTACGAGCTAAGATGCATCGGGATACCGTGGAGGATGGAGGAACTTACATGGGGGCTCTTTTCTTCGCAGTCACTGTGGCAATGTTTAATGGAATATCAGAGCTAAATATGGCCATCATGAAACTTCCTATCTTCTACAAGCAAAGGGACCTTCTTTTCTATCCTGCATGGGCTTATTCTCTTCCACCGTGGATTCTCAAAATACCAATAACCCTAATAGAAGTTGCTATTTGGGAAGGCATCACTTACTATGCCGTTGGCTTTGATCCAAGTTTTGTAAGGCTTTTAAAACAGTATTTGATAATACTGTGCATTAACCAAATGGCATCTTCACTATTTCGGTTGATGGCAGCATTGGGAAGGGATGTTATAGTTGCAAACACAGTTGGAGGATTTGCATTACTAGTAGTTTTGGCCTTGGGAGGATTTGTGATTTCAAGAGAGGATGTGCACAAATGGTTTCTGTGGGGTTACTGGTCCTCACCACTTATGTATGGACAGAATGCTATTGCTGTGAATGAGTTTCTTGGACATAGTTGGACAAAGGTTACTCCTAATTCCAATGAAACACTGGGAGTTCTAATACTTAAAACTCGTGGATTTTTTCCTGAAGCTTATTGGTATTGGATTGGAGTAGGAGCATTGATTGGTTATGTTTTTCTACTCAATTCTCTGTTCACCATGGCTTTGCAATATCTCAGTCCATTCAGAAAGGATCAAGCAGGGCTATCCCAAGAGAAATTGCTTGAGAGAAATGCTTCAACAGCTGAAGCGTTCATTCAATTACAAAATCTAAAGAACTCTTCTGAAACAAAGATGGTGGAAGAAGCAAGCATATCACCCAGAGTTAGTGATGATAAAGCTAACAGATGTGGAAAGAGGGGTATGGTTCTTCCTTTTCAACCGCTGTCCCTCACTTTTGATGAGATCAGATATTCTGTAGACATGCCACAGGAAATGAAAAAACAAGGAGTTTCTGAGGATCGTCTAGAACTCTTGAAGGGTGTTAGTGGTGTCTTTAGGCCTGGAGTATTAACAGCTCTGATGGGTGTAAGTGGTGCTGGCAAGACTACTCTAATGGATGTATTAGCTGGAAGGAAAACTGGTGGATATATAGAGGGAAGCATCACAATATCTGGGTACCCAAAGAAGCAAGAAACATTTGCTCGCATCTCAGGATACTGTGAACAATTTGATATACACTCACCCAATGTCACAGTTTATGAATCTTTGCTATATTCAGCATGGCTTCGGTTGCCCCGTGAAGTTGATAAGGCAACAAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTAGAGCTTAACTCATTAAGAGAAGCACTTGTTGGATTGCCAGGAGAGACAGGACTTTCAACAGAGCAGCGCAAGAGGCTTACAATTGCAGTTGAACTTGTAGCCAACCCATCAATAATATTCATGGATGAGCCAACCTCTGGCCTTGATGCTAGAGCAGCTGCAATTGTAATGAGGACTGTGAGGAACACTGTGGACACAGGACGTACCGTTGTTTGCACCATCCACCAGCCAAGTATTGATATATTTGATGCCTTTGATGAGCTTTTACTTCTGAAATTGGGAGGGGAGCAAATATATGCTGGTCCATTAGGCCGCCACTGTTTTCATCTGATTCAGTACTTTGAGGCTATCGAAGGAATTCCTAAGATTAGAGATGGTTACAATCCTGCAACCTGGATGTTGGAAGTTACATCAGCAGGAACAGAAGCATGTCTTAAGGTCAATTTCACTAATGTGTACAAAAACTCAGAACTACACCGGAGAAACAAACAATTGATCCAAGAACTTAGTATACCTCCCCAAGGTTCAAAGGATCTACACTTTGATAGTCAGTATTCACAGACTTTGGTGACACAATGTAAAGCTTGTCTATGGAAACAACATTTATCATACTGGCGGAATACGTCATATACTGCAGTTAGACTCCTATTTACAACACTAATAGCTTTATTATTTGGGATCATATTTTGGGACATTGGCTTGAAAAGGAGAAAAGAGCAAGATCTTTTCAATGCTATGGGTTCAATGTATGCTGCAGTTACCTTCATTGGAGTCCAAAATGGTGCCTCAGTGCAGCCTGTAATAGCAGTGGAGAGAACAGTCTTCTATAGAGAGAGAGCTGCTGGAATGTATTCAGCTTTGCCATATGCTCTTGCACAGGCTATTATTGAACTTCCCCACATCTTGGTTCAGACCCTGATGTATGGGCTTATAGTATATGCCATGATGGGATTCGATTGGACCACATCAAAGTTCTTGTGGTATCTTTTCTTCATGTACTTCACTTTCTTGTACTACACCTTCTATGGTATGATGACAATGGCCATCACTCCCAACCCACAAGTTGCTAGCATATTGTCCAGTGCATTCTATGCAATATGGAGCCTTTTCTCGGGCTTCATCATTCCCATATCTAGAATACCCATATGGTGGAAGTGGTACTACTGGATTTGTCCTGTTGCATGGACCTTGAATGGATTAGTGGCTTCTCAATATGGTGACAACAGAGACACACTAGAGAATGGTCAAAAGGTTGAAGAATTTGTGAGGAGTTACTTTGGGTTTGAACATGACTTTCTTGGAGTGGTTGCAATTGTGGTGGCCGGTTTCTCAGTGTTGTTTGCACTCATCTTTGCCTTTGGAATCAAAGCGTTCAACTTCCAAAAACGGTGA 4326 0.4082 MEGSDISRVESLRASSSSIWRNHSMDVFSTSEREDDEENLKWAAIERLPTYLRIRRSILRSEDGKGREVDIKQLGLTEKKILLERLVKIAEEDNEKFLLKLRERMDRVGLDIPTIEVRFEHINVEAQVYVGGRALPSLLNFYVNVIEGFLNYLHIIPSPKKTLNILQNISGIIRPRRMTLLLGPPGSGKTTLLLALAGKLGKDLKHSGRVTYNGHGLEEFVPQRTSAYVSQHDNHIGEMTVRETLAFSARCQGVGQNYEMLTELLRREKQAKIIPDPDIDAYMKAAALEGQQTSVVTDYILKILGLEVCADIMVGDGMIRGISGGQKKRVTTGEMLVGPIKVLFMDEISTGLDSSTTFQIINSIRQSIHILNGTALVSLLQPAPETYQLFDDIILLTDGQIVYQGPRENVLEFFESMGFRCPERKGVADFLQEVTSRKDQWQYWARKDEPYSFVTVKDFAEAFQLFHIGQKLGDELVNPFDKSKCHPNALTTKKYGVDRMELLRACSSREFLLMKRNSFVYVFKVTQLIYLAIMTTTLFLRAKMHRDTVEDGGTYMGALFFAVTVAMFNGISELNMAIMKLPIFYKQRDLLFYPAWAYSLPPWILKIPITLIEVAIWEGITYYAVGFDPSFVRLLKQYLIILCINQMASSLFRLMAALGRDVIVANTVGGFALLVVLALGGFVISREDVHKWFLWGYWSSPLMYGQNAIAVNEFLGHSWTKVTPNSNETLGVLILKTRGFFPEAYWYWIGVGALIGYVFLLNSLFTMALQYLSPFRKDQAGLSQEKLLERNASTAEAFIQLQNLKNSSETKMVEEASISPRVSDDKANRCGKRGMVLPFQPLSLTFDEIRYSVDMPQEMKKQGVSEDRLELLKGVSGVFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGSITISGYPKKQETFARISGYCEQFDIHSPNVTVYESLLYSAWLRLPREVDKATRKMFIEEVMELVELNSLREALVGLPGETGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKLGGEQIYAGPLGRHCFHLIQYFEAIEGIPKIRDGYNPATWMLEVTSAGTEACLKVNFTNVYKNSELHRRNKQLIQELSIPPQGSKDLHFDSQYSQTLVTQCKACLWKQHLSYWRNTSYTAVRLLFTTLIALLFGIIFWDIGLKRRKEQDLFNAMGSMYAAVTFIGVQNGASVQPVIAVERTVFYRERAAGMYSALPYALAQAIIELPHILVQTLMYGLIVYAMMGFDWTTSKFLWYLFFMYFTFLYYTFYGMMTMAITPNPQVASILSSAFYAIWSLFSGFIIPISRIPIWWKWYYWICPVAWTLNGLVASQYGDNRDTLENGQKVEEFVRSYFGFEHDFLGVVAIVVAGFSVLFALIFAFGIKAFNFQKR* 1442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0153 1441 Pfam Plant PDR ABC transporter associated 719 780 IPR013581 -
Apr9g0153 1441 Pfam ABC transporter 166 348 IPR003439 GO:0005524
Apr9g0153 1441 Pfam ABC transporter 872 1024 IPR003439 GO:0005524
Apr9g0153 1441 Gene3D - 858 1085 IPR027417 -
Apr9g0153 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 150 423 IPR003439 GO:0005524
Apr9g0153 1441 Pfam ABC-transporter N-terminal 90 141 IPR029481 -
Apr9g0153 1441 PANTHER ATP-BINDING CASSETTE TRANSPORTER 9 1441 - -
Apr9g0153 1441 Pfam ABC-2 type transporter 381 432 IPR043926 GO:0140359
Apr9g0153 1441 PANTHER ABC-2 AND PLANT PDR ABC-TYPE TRANSPORTER FAMILY PROTEIN 9 1441 - -
Apr9g0153 1441 CDD ABCG_PDR_domain2 841 1079 IPR034003 -
Apr9g0153 1441 Gene3D - 153 457 IPR027417 -
Apr9g0153 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 844 1096 IPR003439 GO:0005524
Apr9g0153 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 423 IPR027417 -
Apr9g0153 1441 Pfam ABC-2 type transporter 502 714 IPR013525 GO:0016020|GO:0140359
Apr9g0153 1441 Pfam ABC-2 type transporter 1169 1383 IPR013525 GO:0016020|GO:0140359
Apr9g0153 1441 SMART AAA_5 881 1073 IPR003593 -
Apr9g0153 1441 SMART AAA_5 175 400 IPR003593 -
Apr9g0153 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 865 1079 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0153 Apr-Chr9 2039565 2048201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0153 865 1056 Calmodulin-binding Proteins AT2G36910 26.087 9.68e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0153 K08711 - gmx:100810505 2614.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0153 9 2039565 2048201 Apr9g0153 9 2039565 2048201 ECH
Apr9g0153 9 2039565 2048201 Apr5g1224 5 16716017 16723461 PCT