Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0128 ATGGCGCCGAAGCAGGGGAGAGTGAGGGTTAGCAGAAACCCAGAATTGATTAGGGGAATTGGAAAATACTCAAGGTCTCAGATGTACCATAAGAGGGGTCTCTGGGCCATCAAGGCTAAGAACGGTGGCTCTTTCCCTTGCCATGATTCCAAGCCCAAGCCTCAAGCACCAGCTCAGAAACCCCCTAAGTTCTACCCTGCTGAAGATGTCAAGAAGCCTCTTCTCAACAAGCACAAGCCCAAACCTACCAAGCTCAGGGCTAGCATTACTCCTGGGACTGTGCTGATTCTTCTTGCCGGCAGATTTAAGGGAAAGAGAGTAGTGTTTCTTAAGCAGCTTCCTTCTGGATTGCTTCTTGTAACTGGTCCTTTCAAGATTAATGGAGTTCCTTTGAGACGCGTGAATCAGTCTTATGTGATTGGCACATCAACCAAAGTAGATGTTTCTGCAGTTAATGTGGATAAATTTGATGACAAGTACTTTTCAAAGGAAGCCCAGAAAAAGAAAACGAAGGGAGAAGGGGAGTTCTTTGAGGCAGAAAAGGAGGAGAAAAATGTGCTCCCCCAGCAAAAGAAAGATGACCAAAAGTCTGTAGATTCTGCATTGATAAAAGCAATCGAGAGTGTTCCAGATTTGAAGGTTTACCTAGGTGCCAGATTTTCCTTGAAGGCAGGGGTGAAGCCTCACGAGCTAGTCTTCTAG 702 0.4587 MAPKQGRVRVSRNPELIRGIGKYSRSQMYHKRGLWAIKAKNGGSFPCHDSKPKPQAPAQKPPKFYPAEDVKKPLLNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQSYVIGTSTKVDVSAVNVDKFDDKYFSKEAQKKKTKGEGEFFEAEKEEKNVLPQQKKDDQKSVDSALIKAIESVPDLKVYLGARFSLKAGVKPHELVF* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0128 233 Gene3D - 87 171 IPR014722 -
Apr9g0128 233 SUPERFAMILY Translation proteins SH3-like domain 87 173 IPR008991 -
Apr9g0128 233 Pfam Ribosomal protein L6, N-terminal domain 3 61 IPR005568 GO:0003735|GO:0005840|GO:0006412
Apr9g0128 233 CDD KOW_RPL6 81 233 IPR041997 -
Apr9g0128 233 Pfam Ribosomal protein L6e 126 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Apr9g0128 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 IPR000915 GO:0003735|GO:0005840|GO:0006412
Apr9g0128 233 PANTHER 60S RIBOSOMAL PROTEIN L6 1 233 - -
Apr9g0128 233 MobiDBLite consensus disorder prediction 45 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0128 Apr-Chr9 1522720 1525012 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0128 1 233 Cytoplasmic Ribosomal Protein Gene Family AT1G74050 80.687 1.05e-121 343
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0128 K02934 - gmx:100499766 386.341