Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0111 ATGTTCTCGAGCTCCCAATTCGACGCCACCTCCGCCTTCTCCGGCGGCGGATTCATGGCCTCTCAGCCTTCCCATCTCAACGACTCATCACCCGCACCGCCAAAAAGCCGCGAAACTCAGGGTTTGGTGCCGGTGACAGTGAAGCAGATAAGTGAAGCCTATCAATCTGGTGATGAAAAATCGAATTTTGTAATCAACGGTGTAGATCTGAACAATGTAACTTTGGTTGGAATGGTGTATGAGATAGCTGAGAGAAACACCGATGTTAGTTTTACTTTGGATGATGGAACGGGCCGAATCAAATGTCGAAGATGGGTTAATGAGACTTTTGACACAAAGGAAATGGAAGAAGTAATCAATGGTATGTATGTTCGTGTTTATGGGCATTTGAAGAGCTTTCAGGGTGTGAGGCAACTCGTTGCCTTCTCTGTCAGGCCAGTGACAAATTTTGATGAGATCCCTTTTCACTTTATTGATTGCATACATAACCATCTCCGCACCAAAGTAAAGGTGGAGGGAATTTCTTCTGCACATCCTTCAGCTGACTCGTATAACACTCCTGTCAGAAATGCATCAAATGGATCTCAGGCAACATCATCAAATTCAGTATATGCACAATATAGCGTGGATGGACTAAAGGATTGTGATAAATTGGTTATTGAGTACATACAACAGCATTCAGACATGTCAGATGAACGTGGAGTACATGTCAATGAACTAGCTCGAGAGCTCAAGCTTCCATTGGACAAGATCATGTTATCGCTGAAGACTCTTGGAGATGATGGTTTAGTATACTCCACCATTGACGAAGACCATTATAAACAAGCTTGA 831 0.4344 MFSSSQFDATSAFSGGGFMASQPSHLNDSSPAPPKSRETQGLVPVTVKQISEAYQSGDEKSNFVINGVDLNNVTLVGMVYEIAERNTDVSFTLDDGTGRIKCRRWVNETFDTKEMEEVINGMYVRVYGHLKSFQGVRQLVAFSVRPVTNFDEIPFHFIDCIHNHLRTKVKVEGISSAHPSADSYNTPVRNASNGSQATSSNSVYAQYSVDGLKDCDKLVIEYIQQHSDMSDERGVHVNELARELKLPLDKIMLSLKTLGDDGLVYSTIDEDHYKQA* 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0111 276 PIRSF RPA32 1 276 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Apr9g0111 276 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 1 276 - -
Apr9g0111 276 Gene3D - 35 168 IPR012340 -
Apr9g0111 276 Pfam Replication protein A C terminal 173 271 IPR014892 -
Apr9g0111 276 MobiDBLite consensus disorder prediction 178 198 - -
Apr9g0111 276 CDD RPA2_DBD_D 72 165 - -
Apr9g0111 276 Gene3D - 206 276 IPR036388 -
Apr9g0111 276 SUPERFAMILY "Winged helix" DNA-binding domain 210 274 IPR036390 -
Apr9g0111 276 PANTHER REPLICATION PROTEIN A-RELATED 1 276 IPR040260 -
Apr9g0111 276 MobiDBLite consensus disorder prediction 15 42 - -
Apr9g0111 276 Pfam OB-fold nucleic acid binding domain 73 145 IPR004365 GO:0003676
Apr9g0111 276 SUPERFAMILY Nucleic acid-binding proteins 42 166 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0111 Apr-Chr9 1364917 1368862 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0111 1 274 Core DNA Replication Machinery Family AT2G24490 49.822 1.78e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0111 K10739 - gmx:100802512 454.907
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0111 9 1364917 1368862 Apr9g0111 9 1364917 1368862 ECH