Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0096 ATGGCAATGGAAGGTTCTAGAAGCGGTGATTCTAGAGTGGAGAATTTGATTTCTGCTAAAAGGTCATTGAAACTTAGTTTAGAGAAATCAAAATCGGTGGGTTTAGCGTTAGAGAAAGCAGGGCCACGGTTAGAGGAGATTAGGCTAAGGTTACCGTCGCTTGAATCGGCGGTTCGCCCTATTCGTGCCGATAAGGATGCACTTGCAGCCGTTGGCGGTCACATTAACCGTGCCGTTAGCCCTGCTGCCGCCGTGCTTAAGGTTTTTGATGCCGTTCATGGCCTTGAAAAGTCGATATTGTCGGATCCACGGAATGATCTTGCCGGTTACTTGTCGGTGTTGAAGCGCCTTGAGGAGGCGTTGAGGTTCTTGGGAGATAACTGTGGCTTGGCAATTCAGTGGTTGGAGGATATAGTTGAGTATTTGGAGGATAATTGTGTGGCGGATCAGGTGTATCTTGCAAATTTGAAGAAGGAATTGAAGAGTCTCCGGGAATTGCAGTACAGGGAGATTGATGGTGGATTGTTGGATGCTGCGTTGGATAAGTTGGAGAATGAGTTTAGGTTGTTGTTGACTGAAAACAGTGTGCCGTTGCCAATGTCATCGGCTGCGTCGCTTGGTGATCAAGCGTGCATTGCACCATCGCCTTTGCCGGTGTCTGTTGTTCACAAGTTGCAGGCGATTCTTGGGAGGTTGATTGCTAATGATAGGCTCGAGAAATGTATATCTATTTATGTTGAAGTGCGTAGTTCTAACGTGAGGGCGAGTTTGCGGGCTCTTAATTTGGATTACCTTGAGATATCTGTGTCTGAATTCAATGATGTGCAGATTATAGAGGGTTATATAGCTCAGTGGGGGAAGCATTTGGAGTTTGCGGTGAAGCATTTGTTTGAGGCTGAGTATAAGCTTTGCAATGATGTCTTTGAGAGGATTGGGTTGGATGTGTGGATGGGTTGCTTTTCAAAGATAGCTGCGCAGGCTGGTATTCTTGCATTTCTTCAATTTGGGAAGACTGTTACAGAGAGCAAGAAGGACCCAATTAAGCTTTTGAAGTTGTTGGATATTTTTGCATCTTTGAACAAGTTAAGACTGGATTTCAATAGGCTTTTTGGCGGTGCAGCGTGTGCTGAAATACAGAATTTAACAAGGGATCTTATTAAGAGAGTGATTGATGGAGCGGCAGAGATTTTCTGGGAACTTTTGGTTCAGGTAGAGTTGCAGAGGCAGAATCCACCTCCTCTGGATGGCAATGTTCCGAGACTTGTGAGCTTTATCACCGATTACTGTAACAAACTTCTAGGGGAGAACTATAAGCCAATATTGACTCAGGTTCTGATCATCCATCGAAGTTGGAAGCGCCAAAGCTTTCAGGAGAAACTTCTTGTTACTGAGATTTTGAACATAGTGAAAGCTGTGGAATTGAATGTGGAGACTTGGATCAAGGCTTATGATGATCCTATGCTGTCCAACTTTTTTGCCATGAACAATCACTGGCATCTGTGCAAACATTTGAAAGGGACAAAGCTTGGGGAGCTCTTGGGAGATTCTTGGTTAAGGGATCACGAACAGTATAGGGACTATTACTCTACAATATTCTTGAGGGACAGCTGGGGAAAGCTTCCTGGACATTTGAGTAGGGAAGGGCTGATTCTTTTCTCTGGAGGGCGTGCCACCGCTCGTGACCTGGTCAAGAAAAGGTTGAAAAAGTTCAATGAAGTTTTTGATGAGATGTTTGCAAAGCAGTCAAGCTGGATCATGCCAGAACGAGATCTGAGAGAGAAGACATGTCAGCTTATAGTGCAAGCTGTGGTGCCTGTTTACCGGAGTTACATGCAGAATTATGGTCCTTTGGTTGAGCAAGATGCTAACTCCACAAAATATGCAAAGTACACAGTACAGAAGCTGGAGGAAATGCTCTTGTGTCTTTATCGGCCAAAGCCTGTAAGGCACGGCAGCTTGAGAAGTCCACAGTTTGGTGGAAAATATGGCAATGGAGTTCCTGATCTTCGCAGAACAGCTTCTGCAGTTGTGTAA 2034 0.4489 MAMEGSRSGDSRVENLISAKRSLKLSLEKSKSVGLALEKAGPRLEEIRLRLPSLESAVRPIRADKDALAAVGGHINRAVSPAAAVLKVFDAVHGLEKSILSDPRNDLAGYLSVLKRLEEALRFLGDNCGLAIQWLEDIVEYLEDNCVADQVYLANLKKELKSLRELQYREIDGGLLDAALDKLENEFRLLLTENSVPLPMSSAASLGDQACIAPSPLPVSVVHKLQAILGRLIANDRLEKCISIYVEVRSSNVRASLRALNLDYLEISVSEFNDVQIIEGYIAQWGKHLEFAVKHLFEAEYKLCNDVFERIGLDVWMGCFSKIAAQAGILAFLQFGKTVTESKKDPIKLLKLLDIFASLNKLRLDFNRLFGGAACAEIQNLTRDLIKRVIDGAAEIFWELLVQVELQRQNPPPLDGNVPRLVSFITDYCNKLLGENYKPILTQVLIIHRSWKRQSFQEKLLVTEILNIVKAVELNVETWIKAYDDPMLSNFFAMNNHWHLCKHLKGTKLGELLGDSWLRDHEQYRDYYSTIFLRDSWGKLPGHLSREGLILFSGGRATARDLVKKRLKKFNEVFDEMFAKQSSWIMPERDLREKTCQLIVQAVVPVYRSYMQNYGPLVEQDANSTKYAKYTVQKLEEMLLCLYRPKPVRHGSLRSPQFGGKYGNGVPDLRRTASAVV* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0096 677 SUPERFAMILY Cullin repeat-like 85 643 IPR016159 -
Apr9g0096 677 PANTHER EXOCYST COMPLEX PROTEIN EXO70 12 666 IPR004140 GO:0000145|GO:0006887
Apr9g0096 677 Gene3D Exocyst complex component Exo70 136 650 - -
Apr9g0096 677 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 12 666 - -
Apr9g0096 677 Pfam Exo70 exocyst complex subunit 284 639 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0096 Apr-Chr9 1196174 1200084 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0096 3 677 EXO70 exocyst subunit family AT4G31540 72.965 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0096 K07195 - gmx:100796139 1203.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0096 9 1196174 1200084 Apr9g0096 9 1196174 1200084 ECH