Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0095 ATGGCAGTGGAACTCATGGGGTTCCCAAAACTTGAAGAACAGAAGGCCATACAAGAGGCTGCATCAGAAGGCCTCAAGGGCATGGAGCACCTGATCCGAACCCTCTCCAACCAACCCACCCACTTAAACACCCACCTCACCGACGTAACCGTTTCCAAGTTCAAAAAACTCATCTCCTTGCTCAACCGAACCGGCCACGCCCGTTTCAGACGCGCTCCGCTTCACGCGCCTTCCACATCCCAACCGGTTCAGCTCCCTCCCCCGCAAAACCCCACTCTTTCTTCGCCGCCGCAGTTCGCTTCTCCGGCGCCTGTCAACCACGCGCCGGCGAGCGTGACGCTCGATTTCACGAAGCCGCACAACACCGTTTTGAGCTCCCACGCAAAGTCCGTTGAGCTCGAGTTCTCCAAAGAGACCTTTAGCGTCTCCTCTAACTCATCGTTCATGTCCTCCGCCATCACCGGCGATGGTAGCGTTTCCAACGGAAAACAAGGATCGTCGATTTTTCTCACGCCCGCACCGGCACAGGCACCGCCAGCCACCTCCGCCGGAAAACCACCGCCGTTTAAGAAACGGTGCCACGATCACCGTGAACACTCCGACGACGTCTCTGGATCCAGCAAGTGCCACTGCATCAAGAGAAGGAAAAATAGGGTGAAGAAGACGGTGAGAGTGCCGGCCATTAGTTCGAAGATCGCGGATATACCGCCGGACGAGTACTCGTGGCGGAAATATGGTCAAAAACCGATCAAGGGGTCACCGTACCCACGGGGTTATTATAAGTGCAGCACGGTGAGAGGGTGTCCAGCAAGAAAACACGTGGAGCGTGCACCAGACGATCCAGCGATGCTGATAGTGACGTATGAGGGGGAGCACAGGCACGCGGTTCAAGCCGCGATGCAGGAGAATGCAGCCGGGGTTGTGGGTTTGGTATTCCAGTCAACGTAA 948 0.5654 MAVELMGFPKLEEQKAIQEAASEGLKGMEHLIRTLSNQPTHLNTHLTDVTVSKFKKLISLLNRTGHARFRRAPLHAPSTSQPVQLPPPQNPTLSSPPQFASPAPVNHAPASVTLDFTKPHNTVLSSHAKSVELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGSSIFLTPAPAQAPPATSAGKPPPFKKRCHDHREHSDDVSGSSKCHCIKRRKNRVKKTVRVPAISSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAPDDPAMLIVTYEGEHRHAVQAAMQENAAGVVGLVFQST* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0095 315 MobiDBLite consensus disorder prediction 174 207 - -
Apr9g0095 315 MobiDBLite consensus disorder prediction 188 207 - -
Apr9g0095 315 Gene3D WRKY domain 220 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g0095 315 PANTHER WRKY PROTEIN 12 312 - -
Apr9g0095 315 MobiDBLite consensus disorder prediction 75 105 - -
Apr9g0095 315 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 312 IPR044810 GO:0003700
Apr9g0095 315 SMART WRKY_cls 236 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0095 315 Pfam WRKY DNA -binding domain 238 294 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0095 315 MobiDBLite consensus disorder prediction 80 98 - -
Apr9g0095 315 SUPERFAMILY WRKY DNA-binding domain 234 296 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr9g0095 315 ProSiteProfiles WRKY domain profile. 231 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr9g0095 315 Pfam Plant zinc cluster domain 190 234 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0095 Apr-Chr9 1189569 1191719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0095 1 314 WRKY Transcription Factor Family AT2G24570 64.653 3.91e-121 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr9g0095 WRKY 8.3e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0095 - - gmx:100127381 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr9g0095 9 1189569 1191719 Apr9g0095 9 1189569 1191719 ECH