Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0087 ATGGCTCATAAAAGAACATTATACTATTGCCTTCTCATGCTCTCTATGTTGTCCATTTGGTTTGTGCCATCATTGGGAGACACAGATGCTCAAATTTTGATAAGGTTCAAAAGTTCCTTGTCCAATGACAATGCTTTAAACAACTGGGGGAATGAGCCTAATTTGTGTAAATGGGTTGGTTTATTATGCAAGCCTGACCAAACATTTTATGGCTTGAGACTAGAGAATATGGGACTAGGTGGGAAGGTTGATGTAGACACCTTGTTAGAATTGTCAAATTTGACAAGTTTTAGTGTGATTAACAATACATTTGAGGGTCCAATTCCTGAGTTCAAAAAAATGGTCAAGTTAAGTGGGTTGTTTCTTTCCAATAACAAGTTCTCTGGTGAAATTCCTGATGATGCTTTTGAGGGCTTGAAAACTCTGAAAAGAGTATTCTTGGCTGAAAATGGGTTCACAGGTCACATTCCTAAGTCACTAGCTAACTTGCCTAGACTTTTGGATTTGGAGTTACATGGAAATAGTTTTGGAGGAAACATACCAGAGTTTCAACAAAAGGTTTTCAGGGTTTTTAATTTATCGTATAACCAATTGGAGGGTCAAATACCAGAAAGCTTAAGCAACATGAATACAAGTTCATTTGCTGGCAACGAAGGCCTATGTGGAGCACCTATAAGCCCCTGCAACAACACTGGCTTCACGCCCGACAACACTAAATCTGTGATTCCCAATCAAGCTTCTTCAACTCAAGGAAAGGGAAAGAAGCACCTTATCCTTGTTACTGTCATTGTAGTGGTGGCTGTGGTTGTCTTGGCATCAATAGTAGCACTTGTGCTTATCCATAGCAACAGGAGAAAAAGGTTGCAACCCGAAACATTAGGCAAGCAGGTAAATTCCCAGAACAATGCAAGCTTCAAGGAGTCACAATCCATTGATCTGACAAGTGATTTCAAGAAGGGTGATGATGTAGAATTGAACTTTGTTAGGGAAGGTAGAGGGGGATTTGATTTGCAAGACCTGCTTAGAGCTTCAGCTGTTGTTCTTGGTAGTGGCAGTTTTGGGTCCACCTACAAGGCAATGATTTTGAATGGACCATCTGTGGTTGTGAAGAGGTTTAGGCATATGAACAATATTGGGAAACAGGAGTTCTTTGAGCACATGCAGAGGCTTGGAAGTTTGACACATCCTAATCTTCTCCCACTTGTTGCATTCTACTACAGAAAAGAAGAGAAGTTTTTGGTTTATGACTTTGGTGAAAATGACAGCTTGGCTAGCCATCTACATGGTAGAAATGGCTCTGTACTAAGCTGGTCAACTCGTTTGAAAATCATAAAAGGAGTAGCTAGAGGCTTAGCTTATCTCTATGAAAAGTTCCCTGGACAAAATCTACCTCATGGTCACCTTAAATCCTCCAATGTGGTGCTTGACCATTCATTTGAGCCACATTTGACTGAGTATGGACTTGTGCCAGTGATGAACAAGAGCCATGCTCAACAGTTCATGGCAGCATATAAGGCTCCAGAGGTGAACCAATTTGATAGGCCTAATGAGAAAAGTGATGTTTGGTGTTTAGGAATCCTCATATTGGAATTGTTGACGGGGAAGTTCCCAGCAAATTATCTAAGACATGGGAAAGGAGGGAATGTTGATTTGGCAACATGGGTTGACTCAGTTGTGAGGGAAGAGTGGACTGGTGAGGTGTTTGATAAGGACATTATGGGGACTAGGAATGGTGAAGGTGAGATGCTGAAGCTGTTGAGAATTGGAATGTATTGTTGTGAATGGAATGTGGAGATTAGGTGGGATTGGAGAGAGGCAGTGGCCAAGATTGAGGAGCTAAAGGAGAGGGATAGTGAAGATGAATTCTCTTCTTATGTTAGTGAAGGAGATTTGTACTCAAGGGCTATGACTGATGATGACTTCTCTTTATCTATCACCAAGTGA 1944 0.411 MAHKRTLYYCLLMLSMLSIWFVPSLGDTDAQILIRFKSSLSNDNALNNWGNEPNLCKWVGLLCKPDQTFYGLRLENMGLGGKVDVDTLLELSNLTSFSVINNTFEGPIPEFKKMVKLSGLFLSNNKFSGEIPDDAFEGLKTLKRVFLAENGFTGHIPKSLANLPRLLDLELHGNSFGGNIPEFQQKVFRVFNLSYNQLEGQIPESLSNMNTSSFAGNEGLCGAPISPCNNTGFTPDNTKSVIPNQASSTQGKGKKHLILVTVIVVVAVVVLASIVALVLIHSNRRKRLQPETLGKQVNSQNNASFKESQSIDLTSDFKKGDDVELNFVREGRGGFDLQDLLRASAVVLGSGSFGSTYKAMILNGPSVVVKRFRHMNNIGKQEFFEHMQRLGSLTHPNLLPLVAFYYRKEEKFLVYDFGENDSLASHLHGRNGSVLSWSTRLKIIKGVARGLAYLYEKFPGQNLPHGHLKSSNVVLDHSFEPHLTEYGLVPVMNKSHAQQFMAAYKAPEVNQFDRPNEKSDVWCLGILILELLTGKFPANYLRHGKGGNVDLATWVDSVVREEWTGEVFDKDIMGTRNGEGEMLKLLRIGMYCCEWNVEIRWDWREAVAKIEELKERDSEDEFSSYVSEGDLYSRAMTDDDFSLSITK* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0087 647 ProSiteProfiles Protein kinase domain profile. 342 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0087 647 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Apr9g0087 647 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Apr9g0087 647 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 7 623 - -
Apr9g0087 647 Gene3D Phosphorylase Kinase; domain 1 308 417 - -
Apr9g0087 647 Pfam Protein kinase domain 347 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr9g0087 647 Gene3D Transferase(Phosphotransferase) domain 1 419 632 - -
Apr9g0087 647 Gene3D Ribonuclease Inhibitor 187 228 IPR032675 -
Apr9g0087 647 Pfam Leucine rich repeat 117 175 IPR001611 GO:0005515
Apr9g0087 647 Gene3D Ribonuclease Inhibitor 26 185 IPR032675 -
Apr9g0087 647 SUPERFAMILY Protein kinase-like (PK-like) 347 614 IPR011009 -
Apr9g0087 647 PANTHER LRR RECEPTOR-LIKE KINASE 7 623 - -
Apr9g0087 647 SUPERFAMILY L domain-like 41 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0087 Apr-Chr9 1083448 1086575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr9g0087 4 643 Receptor kinase-like Gene Family AT4G31250 46.043 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr9g0087 Pkinase 6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0087 - - gmx:100781593 1019.99