Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr9g0083 ATGGAACCAAAAGTTGGATTAGAGTTTGATAATGTAGAACAAGCATGGAATTTTTGGACTGAATATGGTAGGAGGATCGGATTTGGAGTTAGAAAGCAGTATTTTAATAAGAGAAAGGAAGATGGTGCTATTACTTCTTGCAGATACGTTTGTTGTAAAGAAGGTCTTCGAAAAGGAAAGAAACAAGATTGTCAAGTTGCTAAACATAGAGTTGAGACAAGAACAGATTGTTCTGTGAGAATTGCAATATCTTTGGGGAAGAATGGGAAGTTTATAATTCATGAGTTTGTAGAAGATCATAATCATCCCTTACAACTTGAGGAGACAACTCACATGTTTGCTTCTCATCATAAGATAAGTGAAGTTCAAGATTATGAGATTGAAATGGCTCAAGAATCTGGTTTGCAACAAAAGTCCTCATTTCAACTCCAAAGCACACTTGCAGGCAATAGATACAATGCCAGATATACTCGGTTGGATGCAAAGAATTACGTGAAGGAAAGAAGACAAAGAAGTATGGTTTATGGAGAAGTTGGTTGTGTGATGGAATATTTTCAACAACAGTTGTTAGATAATCCTTCATTTTTTCATGCATATCAGATGGATTGTGATGAACAAATTACAAATGTTTGTTGGGCTGACGCGAAGATGATTTTAGATTATGCATATTTTGGTGATGTAGTTTCTTTGGACATTACATGTTGCACTAATCGTGCAAATAGACCTCTTGTCTTATTCACAGGTTTTAACCATTATAGAACCACCATCATTTATGGTGCAGCTTTGTTATATAATGAAACGACTAATTCGTTTAAATGGTTGTTTGAAACATTTTCAGAAGCACATAATCACAAAAAACCATTAACGATGTTTACTGACCAAGATCAAGCCATGGCTAAGGCCCTTGTAGAAGTCATGCCAGAGACACATCATTCCTTGTGCACATGGCGTTTAATGCAAAATGGGATCAAACACCTTGGTAATTTGATGAAGGGTGGAAGTCATTTTTTAAGAGACTTCAAAAAATGCATGTATGACTTTGATACCTTCACTGACTTTGAGAAAGCTTGGACCAAGATCGTTCAAGAGTACAATGTCCATGACAACAATTGGATGAACTCACTTTATGCCATAAAGGAAAAATGGGCATCATGTTATATGAAAGAAGTTGTCACCCTAGGGATGCGGAGTACTTAA 1197 0.3609 MEPKVGLEFDNVEQAWNFWTEYGRRIGFGVRKQYFNKRKEDGAITSCRYVCCKEGLRKGKKQDCQVAKHRVETRTDCSVRIAISLGKNGKFIIHEFVEDHNHPLQLEETTHMFASHHKISEVQDYEIEMAQESGLQQKSSFQLQSTLAGNRYNARYTRLDAKNYVKERRQRSMVYGEVGCVMEYFQQQLLDNPSFFHAYQMDCDEQITNVCWADAKMILDYAYFGDVVSLDITCCTNRANRPLVLFTGFNHYRTTIIYGAALLYNETTNSFKWLFETFSEAHNHKKPLTMFTDQDQAMAKALVEVMPETHHSLCTWRLMQNGIKHLGNLMKGGSHFLRDFKKCMYDFDTFTDFEKAWTKIVQEYNVHDNNWMNSLYAIKEKWASCYMKEVVTLGMRST* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr9g0083 398 Pfam FAR1 DNA-binding domain 17 105 IPR004330 -
Apr9g0083 398 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 2 396 IPR031052 GO:0006355
Apr9g0083 398 PANTHER OS03G0181600 PROTEIN 2 396 - -
Apr9g0083 398 Pfam MULE transposase domain 227 321 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr9g0083 Apr-Chr9 1043165 1044361 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Apr9g0083 MULE 8.5e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr9g0083 - - aprc:113847688 839.336